PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | KZV17133.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
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Family | TALE | ||||||||
Protein Properties | Length: 628aa MW: 68790 Da PI: 7.9354 | ||||||||
Description | TALE family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 28.2 | 3.2e-09 | 390 | 427 | 19 | 54 |
HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 Fe ++yp+ +++ LAk++gLt +qV++WF N R + KZV17133.1 390 FEHflHPYPKDSDKLMLAKQTGLTRSQVSNWFINARVR 427 554459******************************88 PP | |||||||
2 | BELL | 118 | 4.4e-38 | 254 | 325 | 1 | 72 |
BELL 1 erqelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 +rqe+q+kkakL+++l+eV++rY+qy++q+q+vis Fe+++g+gsak Yt+lAl++iS++FrcLkdai +qi KZV17133.1 254 DRQEIQMKKAKLVNMLDEVEHRYRQYHHQMQIVISWFEQATGIGSAKTYTALALQTISKQFRCLKDAILGQI 325 699*******************************************************************98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00574 | 4.9E-57 | 184 | 323 | IPR006563 | POX domain |
Pfam | PF07526 | 7.3E-47 | 190 | 321 | IPR006563 | POX domain |
PROSITE profile | PS50071 | 12.147 | 368 | 431 | IPR001356 | Homeobox domain |
CDD | cd00086 | 1.55E-11 | 371 | 432 | No hit | No description |
SMART | SM00389 | 2.3E-9 | 371 | 435 | IPR001356 | Homeobox domain |
SuperFamily | SSF46689 | 8.55E-17 | 372 | 437 | IPR009057 | Homeodomain-like |
Gene3D | G3DSA:1.10.10.60 | 3.3E-28 | 374 | 437 | IPR009057 | Homeodomain-like |
Pfam | PF05920 | 5.6E-18 | 388 | 427 | IPR008422 | Homeobox KN domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0009610 | Biological Process | response to symbiotic fungus | ||||
GO:0009737 | Biological Process | response to abscisic acid | ||||
GO:0010197 | Biological Process | polar nucleus fusion | ||||
GO:0010201 | Biological Process | response to continuous far red light stimulus by the high-irradiance response system | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0005737 | Cellular Component | cytoplasm | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0042803 | Molecular Function | protein homodimerization activity | ||||
GO:0046982 | Molecular Function | protein heterodimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 628 aa Download sequence Send to blast |
MATYFHGNSE IQGGGDGLQT LILMNPSYVG FSENQPPPPA PPPTGNNLVF LNSSNNINLP 60 NAPLPSQIQH LVGVPLQGAS ASTPAASSQD PYGQHDVSVL HGFLPRNLYN QQHIDMVAAR 120 EVTRPHQGLS LSLSSQQPVS YSSFRLEREV PTQPLMAVAR PRENDVRASG GSPSSNSGVS 180 NGVNGVQSVM FNSKYLKAAQ ELLDEVVKVQ KGAKIVAELA EGVQTTGEPS GAAGSGGGGR 240 EESKKIGADL TTADRQEIQM KKAKLVNMLD EVEHRYRQYH HQMQIVISWF EQATGIGSAK 300 TYTALALQTI SKQFRCLKDA ILGQIKAATK SLGEEESFGG KNEGSKLKYV DNQIRQQRAL 360 QQLGMIQHNA WRPQRGLPER SVSVLRAWLF EHFLHPYPKD SDKLMLAKQT GLTRSQVSNW 420 FINARVRLWK PMVEEMYLEE TKEQERNGLE DKSQDEDSTP KKTAAQAKNP TFEYHNSSRN 480 ESASVSTSTA FTSPTGVKNN SDFHLIGSSE MVNFAQTSPK KPRIPSTTNM DSKPTIPANE 540 LLPLKFGNER QSRDEFTLFG APTNFIGGFG SYPMGELGRF GDQQFQTPYS GNGVSLTLGL 600 PHQNFMPNQS IQLERGGGDS NDFGGMIV |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
3k2a_A | 9e-16 | 377 | 435 | 5 | 63 | Homeobox protein Meis2 |
3k2a_B | 9e-16 | 377 | 435 | 5 | 63 | Homeobox protein Meis2 |
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Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | KZV17133.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020553279.1 | 0.0 | BEL1-like homeodomain protein 1 | ||||
Swissprot | Q9SJ56 | 1e-145 | BLH1_ARATH; BEL1-like homeodomain protein 1 | ||||
TrEMBL | A0A2Z7A8I0 | 0.0 | A0A2Z7A8I0_9LAMI; Uncharacterized protein | ||||
STRING | XP_009628712.1 | 0.0 | (Nicotiana tomentosiformis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA1478 | 24 | 67 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G35940.3 | 1e-134 | BEL1-like homeodomain 1 |
Publications ? help Back to Top | |||
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