PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

KZV15975.1

Organism

Dorcoceras hygrometricum

Taxonomic ID

472368

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras

Family

NAC

Protein Properties

Length: 220aa MW: 25342.5 Da PI: 6.9101

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
KZV15975.1	genome	CNU	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	95.1	1.1e-29	7	79	55	128
NAM 55 ekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128 ++ewyfF++r+ ky++g+r+nra+ +gyWkat d+++ + ++e++g kktLvfy+g+ap+g+kt+W+mhey+l KZV15975.1 7 TDEWYFFTSRELKYPNGSRPNRAAGDGYWKATVADQKIQE-RQEVIGFKKTLVFYHGKAPNGKKTNWIMHEYTL 79 469**********************************9.999**************************97 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS51005	35.332	1	105	IPR003441	NAC domain
SuperFamily	SSF101941	1.57E-32	7	103	IPR003441	NAC domain
Pfam	PF02365	1.6E-14	10	79	IPR003441	NAC domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 220 aa Download sequence Send to blast
MYPTLATDEW YFFTSRELKY PNGSRPNRAA GDGYWKATVA DQKIQERQEV IGFKKTLVFY 60 HGKAPNGKKT NWIMHEYTLR QRSTRNDANN NMRSDNCVLC RIHERKRTAV IQPNLPTQNV 120 EVPQTNQVRP QQIGLAIQPN LPTQNVEVPQ TNHFPSLDFF DQPFSIVGLL QLDNCMPCQI 180 YERKPAVVSS SNSACVTNSN DRMEDEVIED IGQYLLDNFD

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
3swm_A	6e-35	5	109	71	172	NAC domain-containing protein 19
3swm_B	6e-35	5	109	71	172	NAC domain-containing protein 19
3swm_C	6e-35	5	109	71	172	NAC domain-containing protein 19
3swm_D	6e-35	5	109	71	172	NAC domain-containing protein 19
3swp_A	6e-35	5	109	71	172	NAC domain-containing protein 19
3swp_B	6e-35	5	109	71	172	NAC domain-containing protein 19
3swp_C	6e-35	5	109	71	172	NAC domain-containing protein 19
3swp_D	6e-35	5	109	71	172	NAC domain-containing protein 19

Cis-element ? help Back to Top
Source	Link
PlantRegMap	KZV15975.1

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
TrEMBL	A0A2Z7AAJ8	1e-165	A0A2Z7AAJ8_9LAMI; NAC domain-containing protein 2-like
STRING	VIT_07s0031g02610.t01	5e-37	(Vitis vinifera)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G08790.1	3e-38	NAC family protein