PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KZV15132.1
Organism
Dorcoceras hygrometricum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
Family GeBP
Protein Properties Length: 346aa    MW: 39085.2 Da    PI: 4.9037
Description GeBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KZV15132.1genomeCNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF57386.24.3e-27133222497
      DUF573   4 qrlwseeDeivlLqGlidfkaktgkspsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskkiWg 97 
                  rlw+++Dei+lL  ++dfk++++   sd   afy+ vk+++ +++s++ql +Ki rLKk+f +  kk  +g++p+fsk+hd  +felskkiWg
  KZV15132.1 133 TRLWNDDDEIALLNRMVDFKKSKN---SDFRGAFYDSVKGKLRVNFSSEQLRTKIARLKKRFFNALKK-GNGSDPVFSKPHDVMVFELSKKIWG 222
                 79*****************87777...567799***********************************.99**********************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF045043.4E-26133222IPR007592Protein of unknown function DUF573
Sequence ? help Back to Top
Protein Sequence    Length: 346 aa     Download sequence    Send to blast
MAPKSLLGLQ SSKRQDELER PTSSEERGDE QESEEEDSSG EEDEDSSEEE EEDQEKTPEI  60
LPKSIARENG SGSEPESDDS PSVYKMQPIP KASATASKRK NQQIGNGDDS PKSNKRPKAV  120
TIPPTPGGSG FITRLWNDDD EIALLNRMVD FKKSKNSDFR GAFYDSVKGK LRVNFSSEQL  180
RTKIARLKKR FFNALKKGNG SDPVFSKPHD VMVFELSKKI WGRESGNKND SNQGDGEKSK  240
KDSVEEEKNV SGEEEVEKDK NYGGEGLRWS KFQFLSYSFD NLVGKFPSLR MSDSGTSLVK  300
EKLSFVGNSK AKELDEKWRQ MLLEETDLHY RMLSLMREQI KLALDQ
Cis-element ? help Back to Top
SourceLink
PlantRegMapKZV15132.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011079031.16e-89STOREKEEPER protein
TrEMBLA0A2Z7A8D10.0A0A2Z7A8D1_9LAMI; Mediator-associated protein 1-like
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA23692041
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G11510.18e-16DNA-binding storekeeper protein-related transcriptional regulator