PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | KZV14713.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
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Family | bZIP | ||||||||
Protein Properties | Length: 383aa MW: 40720.7 Da PI: 5.1485 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 76.6 | 3.2e-24 | 284 | 346 | 1 | 63 |
XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 e+e+kr++rkq+NRe+ArrsR+RK+ae+eeL+++v++L +eN++L++el++l++e++kl+se+ KZV14713.1 284 EREIKRQKRKQSNRESARRSRLRKQAECEELQQRVETLNNENRTLRDELQRLSEECEKLTSEN 346 89***********************************************************98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF07777 | 7.3E-30 | 1 | 93 | IPR012900 | G-box binding protein, multifunctional mosaic region |
Gene3D | G3DSA:1.20.5.170 | 4.3E-20 | 278 | 344 | No hit | No description |
Pfam | PF00170 | 1.5E-21 | 284 | 346 | IPR004827 | Basic-leucine zipper domain |
SMART | SM00338 | 2.5E-22 | 284 | 348 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 13.599 | 286 | 349 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 9.38E-12 | 287 | 343 | No hit | No description |
CDD | cd14702 | 1.51E-25 | 289 | 339 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 291 | 306 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0010310 | Biological Process | regulation of hydrogen peroxide metabolic process | ||||
GO:0010629 | Biological Process | negative regulation of gene expression | ||||
GO:0090342 | Biological Process | regulation of cell aging | ||||
GO:0005737 | Cellular Component | cytoplasm | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding | ||||
GO:0044212 | Molecular Function | transcription regulatory region DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 383 aa Download sequence Send to blast |
MGTGDDGTPS KSSKPTSSPQ EAPATPSYSD WSSSMQAFYG AGATPPFFAS SVPSPTPHPY 60 MWGGQHPLMP PYGTPVPYPA LYPPAGVYAH PNMAAAPGTV PGTAEYDGKA AEGKDRVSGK 120 KAKGASGNQV LVGGRSKDGG KAASGSGNDG VRRWLGMDLM LELLSSFDAR VAFYAESGSE 180 DSSDASYDDD NNDQDFSATR KGSFEQMLAD GANAQNNAVP ANFHTSIPGN PVVSMPATNL 240 NIGMDLWNAS PAGSGPMKLR PSPAGVSPSV APSGMMNEQW VQDEREIKRQ KRKQSNRESA 300 RRSRLRKQAE CEELQQRVET LNNENRTLRD ELQRLSEECE KLTSENNAIK GELTSLCGPD 360 AVSSIENGNP GSRSQSRGDE GNR |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 300 | 306 | RRSRLRK |
2 | 300 | 307 | RRSRLRKQ |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Binds to the G-box motif (5'-CCACGTGG-3') of the rbcS-1A gene promoter (PubMed:1373374). G-box and G-box-like motifs are cis-acting elements defined in promoters of certain plant genes which are regulated by such diverse stimuli as light-induction or hormone control. Binds to the G-box motif 5'-CACGTG-3' of LHCB2.4 (At3g27690) promoter. May act as transcriptional activator in light-regulated expression of LHCB2.4. Probably binds DNA as monomer. DNA-binding activity is redox-dependent (PubMed:22718771). {ECO:0000269|PubMed:1373374, ECO:0000269|PubMed:22718771}. |
Binding Motif ? help Back to Top | |||
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Motif ID | Method | Source | Motif file |
MP00039 | PBM | Transfer from AT4G36730 | Download |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | KZV14713.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | Retrieve |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_011097214.1 | 0.0 | G-box-binding factor 1-like isoform X1 | ||||
Swissprot | P42774 | 1e-101 | GBF1_ARATH; G-box-binding factor 1 | ||||
TrEMBL | A0A2Z7A0Q4 | 0.0 | A0A2Z7A0Q4_9LAMI; G-box-binding factor 1 | ||||
STRING | XP_004143501.1 | 1e-159 | (Cucumis sativus) | ||||
STRING | XP_004172454.1 | 1e-159 | (Cucumis sativus) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA3780 | 24 | 46 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G35530.1 | 3e-49 | basic region/leucine zipper transcription factor 16 |