PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

KZV14549.1

Organism

Dorcoceras hygrometricum

Taxonomic ID

472368

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras

Family

TCP

Protein Properties

Length: 455aa MW: 47712.8 Da PI: 10.1784

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
KZV14549.1	genome	CNU	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	124.3	1.3e-38	132	260	3	112
TCP 3 gkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec......eaesssssasnsssg....... 88 + k++++++hTkv+gR+RR+R++a caar+F+L++eLG+++d++ti WLlqqa+pai+++tgt++++a+ + ss+++ s++ KZV14549.1 132 PPKKPTKDRHTKVDGRGRRIRMPAACAARVFQLTRELGHKSDGETIVWLLQQAEPAIIAATGTGTIPANLStlnipiR-----SSGATLSAPpsksaph 225 5699***********************************************************888884433222211.....1111111111112223 PP TCP 89 ..........kaaksaa.kskksqksaasalnlak 112 +++ +++ ++ + +++a+ l+ a+ KZV14549.1 226 sfsstfglahHHSYEENfSQMFGFHQSAHLLQAAH 260 33333344442222222233333333333333333 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS51369	27.249	137	191	IPR017887	Transcription factor TCP subgroup
Pfam	PF03634	2.6E-35	137	239	IPR005333	Transcription factor, TCP

Sequence ? help Back to Top
Protein Sequence Length: 455 aa Download sequence Send to blast
MEITHSTENN TPPSNAAAAS SSHQHTPPYL LHHLHGRSPS FITTLNTPGR VGSFTGTSSS 60 SSSSSSSSSV AAAAVSATGI SSQSATGSLS PQVLDASLSM TTSSQIQTDT STLQKPARQT 120 QPAAAELVAQ RPPKKPTKDR HTKVDGRGRR IRMPAACAAR VFQLTRELGH KSDGETIVWL 180 LQQAEPAIIA ATGTGTIPAN LSTLNIPIRS SGATLSAPPS KSAPHSFSST FGLAHHHSYE 240 ENFSQMFGFH QSAHLLQAAH LKEALAFRNS AGEGGGRGGQ KAAENSAGKR YREDIFKQDN 300 PNISNNNTAA AAAGNSPGSM LRHSNMMLTA DMRAVDPSPS SGSAGSTFWK LPMSTSGGGG 360 NAQQTVQSAA SSCSAAGPSE TVRMWPFSTA HGGENTNTLQ SPFHFMPTFS YPGNLEYRRS 420 NQLQLGTMLP PSENPNLGIL AALNAYSKNQ SKHEL

Sequence ? help Back to Top

Protein Sequence Length: 455 aa Download sequence Send to blast

MEITHSTENN TPPSNAAAAS SSHQHTPPYL LHHLHGRSPS FITTLNTPGR VGSFTGTSSS  60
SSSSSSSSSV AAAAVSATGI SSQSATGSLS PQVLDASLSM TTSSQIQTDT STLQKPARQT  120
QPAAAELVAQ RPPKKPTKDR HTKVDGRGRR IRMPAACAAR VFQLTRELGH KSDGETIVWL  180
LQQAEPAIIA ATGTGTIPAN LSTLNIPIRS SGATLSAPPS KSAPHSFSST FGLAHHHSYE  240
ENFSQMFGFH QSAHLLQAAH LKEALAFRNS AGEGGGRGGQ KAAENSAGKR YREDIFKQDN  300
PNISNNNTAA AAAGNSPGSM LRHSNMMLTA DMRAVDPSPS SGSAGSTFWK LPMSTSGGGG  360
NAQQTVQSAA SSCSAAGPSE TVRMWPFSTA HGGENTNTLQ SPFHFMPTFS YPGNLEYRRS  420
NQLQLGTMLP PSENPNLGIL AALNAYSKNQ SKHEL

Cis-element ? help Back to Top
Source	Link
PlantRegMap	KZV14549.1

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_011087706.1	1e-124	transcription factor TCP8
TrEMBL	A0A2Z6ZZD8	0.0	A0A2Z6ZZD8_9LAMI; Uncharacterized protein
STRING	Migut.B00803.1.p	1e-107	(Erythranthe guttata)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA11484	21	25

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G58100.1	2e-64	TCP family protein