PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | KZV14447.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
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Family | NAC | ||||||||
Protein Properties | Length: 161aa MW: 18483.1 Da PI: 9.8265 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 139.4 | 2.2e-43 | 5 | 135 | 2 | 127 |
NAM 2 ppGfrFhPtdeelvveyLkkkvegkklel.eevikevdiykvePwdLpk....kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 +pGfrF Pt+eelv++yL+ ++e +kle+ ++vi+ v+iy++ePw+Lpk +++++++w+fF+++++++a+ r+nr+t++gyWkatg+ +v+++ KZV14447.1 5 APGFRFYPTEEELVSFYLRSQLELEKLETiNRVIPPVQIYQFEPWQLPKqcgeLCQGDTEQWFFFVPKKENEARRGRPNRTTATGYWKATGSPSHVHAA 103 69***********************97762556***************646654445777*************************************** PP NAM 96 kgelvglkktLvfykgrapkgektdWvmheyr 127 +g+ +g+k+++vfykg+a +g+kt+W m+ey+ KZV14447.1 104 DGKSIGVKRSMVFYKGKAGSGRKTKWKMNEYT 135 *******************************8 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 9.29E-42 | 3 | 152 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 42.156 | 4 | 159 | IPR003441 | NAC domain |
Pfam | PF02365 | 4.5E-23 | 6 | 135 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 161 aa Download sequence Send to blast |
MEEIAPGFRF YPTEEELVSF YLRSQLELEK LETINRVIPP VQIYQFEPWQ LPKQCGELCQ 60 GDTEQWFFFV PKKENEARRG RPNRTTATGY WKATGSPSHV HAADGKSIGV KRSMVFYKGK 120 AGSGRKTKWK MNEYTAIVQD SNTTVPKVRK FSLGSVYTGA Y |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
3ulx_A | 2e-29 | 4 | 134 | 15 | 138 | Stress-induced transcription factor NAC1 |
Search in ModeBase |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | KZV14447.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_022851387.1 | 4e-76 | NAC domain-containing protein 90-like | ||||
Swissprot | Q9FMR3 | 1e-63 | NAC90_ARATH; NAC domain-containing protein 90 | ||||
TrEMBL | A0A2Z6ZYY1 | 1e-117 | A0A2Z6ZYY1_9LAMI; NAC domain-containing protein 90-like | ||||
STRING | Migut.N02478.1.p | 3e-73 | (Erythranthe guttata) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA2494 | 23 | 57 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G22380.1 | 4e-66 | NAC domain containing protein 90 |
Publications ? help Back to Top | |||
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