PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Dca57858.1
Organism
Dianthus caryophyllus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Caryophyllaceae; Caryophylleae; Dianthus
Family bZIP
Protein Properties Length: 467aa    MW: 51618.6 Da    PI: 8.0577
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Dca57858.1genomeDCAView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_143.76e-144792449
                XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
      bZIP_1  4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkel 49
                ++r +r++kNRe+A rsR+R++a++ eLe+++ eL++eN +L+k  
  Dca57858.1 47 DRRYKRMMKNRESAARSRARRQAYTSELEREIVELKEENAKLRKHQ 92
                7899***************************************864 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1701.7E-123994No hitNo description
SMARTSM003382.2E-1044108IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.8294690IPR004827Basic-leucine zipper domain
PfamPF001701.2E-114791IPR004827Basic-leucine zipper domain
SuperFamilySSF579594.19E-94891No hitNo description
PROSITE patternPS0003605166IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005739Cellular Componentmitochondrion
GO:0009536Cellular Componentplastid
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 467 aa     Download sequence    Send to blast
MASLNSSFEA SAASSPPPPL SFFGCFSSRS KRVSQDQTED DDDSRGDRRY KRMMKNRESA  60
ARSRARRQAY TSELEREIVE LKEENAKLRK HQLEIEILKR LQREAFSDIM KLRDRQDKVE  120
KILTHGISKG SPFKDDGTRV KGEVGVTGTG LLVDSIDQAK VDAIQCAGLR TGIDTRITFE  180
TRVYQSGVLE ADFICGQRNL GDSDDSLEGT LSLAKVSYTA NMTDWLSVVA MPMGARCKDL  240
AISMGSLVQE KGLTNYSSLG PPLLHHNCGS AVGLMMKNAS IAASLARFVV DLPGSVGQCF  300
GTFGQIVCQL PRASKLSLYG LHQALMSGLQ NSPGAITIPL RIWRRRQRPE SPTQAFSEID  360
PTGSLAVMLE SELDESTRVR GWIQTKSYNP SHIQWSVGIS DIPDDEIGWG LSLGGEIQGP  420
KSLDHFQVEA FLKFNFGRRL SFQPAFVYLM DGSNQMPALT FRSTWSL
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021847187.11e-172uncharacterized protein LOC110786909 isoform X1
TrEMBLA0A0K9QIC01e-172A0A0K9QIC0_SPIOL; Uncharacterized protein (Fragment)
STRINGXP_010692510.11e-168(Beta vulgaris)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G17770.25e-08basic region/leucine zipper motif 27