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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
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| TF ID | Dca37363.1 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Caryophyllaceae; Caryophylleae; Dianthus
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| Family | NAC | ||||||||
| Protein Properties | Length: 319aa MW: 35729.7 Da PI: 6.1115 | ||||||||
| Description | NAC family protein | ||||||||
| Gene Model |
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| Signature Domain? help Back to Top | |||||||
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| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | NAM | 36.3 | 1.7e-11 | 1 | 27 | 102 | 128 |
NAM 102 lkktLvfykgrapkgektdWvmheyrl 128
++ktLvfykgrap+g+k+dW+mheyrl
Dca37363.1 1 MRKTLVFYKGRAPHGQKSDWIMHEYRL 27
89***********************98 PP
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| Protein Features ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| Database | Entry ID | E-value | Start | End | InterPro ID | Description |
| PROSITE profile | PS51005 | 20.605 | 1 | 65 | IPR003441 | NAC domain |
| SuperFamily | SSF101941 | 1.83E-13 | 1 | 65 | IPR003441 | NAC domain |
| Gene Ontology ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| GO Term | GO Category | GO Description | ||||
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
| GO:0003677 | Molecular Function | DNA binding | ||||
| Sequence ? help Back to Top |
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| Protein Sequence Length: 319 aa Download sequence Send to blast |
MRKTLVFYKG RAPHGQKSDW IMHEYRLDDC SNINDDIHVT SHAMNNNNGD FTQEEGWVVC 60 RIFKKKNHIK TLDHHHNNNT SSINNNNNNN NNNNNNNEMS LLMESHSTML DSPSDHDLDN 120 DQGALEQIFQ SLGSKNNVFT RPSFNHRLDN SNSINSISNS ISMISNSSNN NKFMKLPSLE 180 SPNNSTTHLT PFYHHPMHPE NDVVSAANTS ETDLGDWATL DRLVATHLNG HSTTDTTMSS 240 IFSTSSSSLS TSAGCKIYNN ITNINNRNNI TTTTTNNNSD ALENNYGSNN NNNEIIDLWS 300 FTRSTLQIDP LCHVSDGGI |
| Regulation -- PlantRegMap ? help Back to Top | ||||||
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| Source | Upstream Regulator | Target Gene | ||||
| PlantRegMap | Retrieve | - | ||||
| Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| Hit ID | E-value | Description | ||||
| AT2G46770.1 | 1e-26 | NAC family protein | ||||
| ©2010-2022, Center
for Bioinformatics, Peking University Last Modified: 2022-12-08 Questions or Comments, please contact  |
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