PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Dca36044.1
Organism
Dianthus caryophyllus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Caryophyllaceae; Caryophylleae; Dianthus
Family EIL
Protein Properties Length: 486aa    MW: 53181.9 Da    PI: 5.7226
Description EIL family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Dca36044.1genomeDCAView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1EIN3236.12.1e-728210131303
                 X----STTS-HHHHHHHHHHHSSSSSS-TTS--TTT--HHHH---S--HHHHHHT--TT--.-----GGG--HHHHHHHHHHHHHHTGGGHHHHHHTTT CS
        EIN3 131 seshslselqDTtlgSLLsalmqhcdppqrrfplekgvepPWWPtGkelwwgelglskdqgtppykkphdlkkawkvsvLtavikhmsptieeireler 229
                 + +++l++lqD+tlgSLLs+lmqhcdppqr++plekg++pPWWP+G+e+ww++lgl+k q+ ppykkphdlkk+wkv+vLtavikhmsp+i++ir+l+r
  Dca36044.1   8 NGQSTLQDLQDATLGSLLSSLMQHCDPPQRKYPLEKGIPPPWWPSGNEDWWAKLGLPKGQS-PPYKKPHDLKKMWKVGVLTAVIKHMSPDIAKIRRLVR 105
                 67899********************************************************.9************************************ PP

                 TSSSSTTT--SHHHHHHHHHHTTTTT-S--XXXX..XX.......XXXXXXXXXXXXXXXXXXXXXXXXXX.XXXXXXXXXX................. CS
        EIN3 230 qskylqdkmsakesfallsvlnqeekecatvsah..ss.......slrkqspkvtlsceqkedvegkkeskikhvqavktta................. 302
                 qsk+lqdkm+akes ++l vln+ee+++ + s++  +s         r ++++  +s+++++dv+g ++   + ++++++++                 
  Dca36044.1 106 QSKCLQDKMTAKESSIWLGVLNREESLVSQPSSDngMSsvtgsppGPRGSKKRPAVSSDSDYDVDGIDDATASVSSKDERKNqqsdvettepvekqtki 204
                 **********************************66225777766556688899999999*****5444444444444444433334332333333333 PP

                 .....X CS
        EIN3 303 .....g 303
                      +
  Dca36044.1 205 dndvdK 210
                 333330 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF048733.3E-664130No hitNo description
Gene3DG3DSA:1.10.3180.102.0E-726137IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
SuperFamilySSF1167682.48E-6211133IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 486 aa     Download sequence    Send to blast
GANKGGVNGQ STLQDLQDAT LGSLLSSLMQ HCDPPQRKYP LEKGIPPPWW PSGNEDWWAK  60
LGLPKGQSPP YKKPHDLKKM WKVGVLTAVI KHMSPDIAKI RRLVRQSKCL QDKMTAKESS  120
IWLGVLNREE SLVSQPSSDN GMSSVTGSPP GPRGSKKRPA VSSDSDYDVD GIDDATASVS  180
SKDERKNQQS DVETTEPVEK QTKIDNDVDK GAPVRSKSSL SKKVPANKPT KKKRLRGGGS  240
RSEKQPPSKD DQQPTQSGNE QQPSQSVQLP MSSRNESGAG ETSICVLEME QTDPSLSGHN  300
THGTYQENGA VEPLLPMDNS YLEPYHPPMS DLNQFSHFSS VPHTNLLSGQ NMFVGEQPFL  360
YSGVQNTDLQ QGDTYYNPPI QYGQRHDEKQ AQHAMSGQQS KADVAGMHLT SLNSIGDEIT  420
GENLHHFGVD AFGSERNRPL ENHLGSPLHG LSLDFDQFDI PGIEGFGLGD DFLAVDDMDF  480
LQYTGA
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wij_A6e-76101419140ETHYLENE-INSENSITIVE3-like 3 protein
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021772011.10.0ETHYLENE INSENSITIVE 3-like 3 protein
RefseqXP_021772012.10.0ETHYLENE INSENSITIVE 3-like 3 protein
RefseqXP_021772013.10.0ETHYLENE INSENSITIVE 3-like 3 protein
RefseqXP_021772014.10.0ETHYLENE INSENSITIVE 3-like 3 protein
RefseqXP_021772015.10.0ETHYLENE INSENSITIVE 3-like 3 protein
TrEMBLA0A0K9S1031e-165A0A0K9S103_SPIOL; Uncharacterized protein
STRINGXP_010688276.11e-161(Beta vulgaris)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G73730.12e-88ETHYLENE-INSENSITIVE3-like 3