PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Dca35212.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Caryophyllaceae; Caryophylleae; Dianthus
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Family | VOZ | ||||||||
Protein Properties | Length: 484aa MW: 54381.2 Da PI: 5.697 | ||||||||
Description | VOZ family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | VOZ | 437.7 | 1.5e-134 | 206 | 422 | 1 | 217 |
VOZ 1 pppsaflgpkcalwdctrpaqgsewlqdycssfhatlalneglpgttpvlrpkgidlkdgllfaalsakvqgkevgipecegaatakspwnaaelfdls 99 pppsaflgpkcalwdc+rpaqgs+w+ dycssfhatlalneg+pg+tpvlrp+gi+lkdgllf+alsakvqgk+vgipecegaat+kspwna+elfdls Dca35212.1 206 PPPSAFLGPKCALWDCPRPAQGSDWWLDYCSSFHATLALNEGPPGMTPVLRPGGIGLKDGLLFSALSAKVQGKDVGIPECEGAATTKSPWNAPELFDLS 304 89************************************************************************************************* PP VOZ 100 llegetirewlffdkprrafesgnrkqrslpdysgrgwhesrkqvmkefgglkrsyymdpqpsssfewhlyeyeineldalalyrlelklvdekksakg 198 +legetirewlffdkprrafesgnrkqrslpdysgrgwhesrkqvm+ef+glkrsyymdpqp++ +ewhlyeyein++d +alyrlelklvd+kk+++g Dca35212.1 305 VLEGETIREWLFFDKPRRAFESGNRKQRSLPDYSGRGWHESRKQVMNEFNGLKRSYYMDPQPLNIYEWHLYEYEINKCDVCALYRLELKLVDGKKTPRG 403 *************************************************************************************************** PP VOZ 199 kvskdsladlqkklgrlta 217 k ++ s+++lqkk+grlta Dca35212.1 404 KTAHVSVTELQKKMGRLTA 422 *****************97 PP |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0009408 | Biological Process | response to heat | ||||
GO:0009414 | Biological Process | response to water deprivation | ||||
GO:0009631 | Biological Process | cold acclimation | ||||
GO:0009816 | Biological Process | defense response to bacterium, incompatible interaction | ||||
GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated | ||||
GO:0048578 | Biological Process | positive regulation of long-day photoperiodism, flowering | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 484 aa Download sequence Send to blast |
MRKVLKRNGC KSASHQLFKD RAKNRVDDLQ MMFSDLQSAR KESRTVEATV LEEQVYQMLR 60 EWKAELNEPS PASSLQNDSL GTFSSDIYRL LHLCDEEDDA TSPFELSAPK PEPDAQNFQV 120 GGATVIQPGL DVKHRPEEQN HAGVDQCKEP PGFQTLVTNN MDMATQLDYN QFNLNLELEH 180 HYLNGYLGIG VDTANSISGF LPNISPPPSA FLGPKCALWD CPRPAQGSDW WLDYCSSFHA 240 TLALNEGPPG MTPVLRPGGI GLKDGLLFSA LSAKVQGKDV GIPECEGAAT TKSPWNAPEL 300 FDLSVLEGET IREWLFFDKP RRAFESGNRK QRSLPDYSGR GWHESRKQVM NEFNGLKRSY 360 YMDPQPLNIY EWHLYEYEIN KCDVCALYRL ELKLVDGKKT PRGKTAHVSV TELQKKMGRL 420 TAEFPLDNKR PLKGGGGTKT NAKEDAGNRS ATNRSSVVQD EAFNLGMPTP YEYLVENLSE 480 YYLK |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcriptional activator acting positively in the phytochrome B signaling pathway. Functions redundantly with VOZ2 to promote flowering downstream of phytochrome B (phyB). Down-regulates 'FLOWERING LOCUS C' (FLC) and up-regulates 'FLOWERING LOCUS T' (FT). Binds to the 38-bp cis-acting region of the AVP1 gene. Interacts with phyB in the cytoplasm and is translocated to the nucleus at signal transmission, where it is subjected to degradation in a phytochrome-dependent manner. {ECO:0000269|PubMed:15295067, ECO:0000269|PubMed:22904146}. |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: By far-red light. {ECO:0000269|PubMed:22904146}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_021726543.1 | 0.0 | transcription factor VOZ1-like | ||||
Refseq | XP_021726544.1 | 0.0 | transcription factor VOZ1-like | ||||
Swissprot | Q9SGQ0 | 0.0 | VOZ1_ARATH; Transcription factor VOZ1 | ||||
TrEMBL | A0A0K9QIS6 | 0.0 | A0A0K9QIS6_SPIOL; Uncharacterized protein | ||||
STRING | XP_010686387.1 | 0.0 | (Beta vulgaris) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G28520.2 | 0.0 | vascular plant one zinc finger protein |
Publications ? help Back to Top | |||
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