PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Dca32558.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Caryophyllaceae; Caryophylleae; Dianthus
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Family | G2-like | ||||||||
Protein Properties | Length: 206aa MW: 23541.6 Da PI: 7.3807 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 47.8 | 3.2e-15 | 6 | 35 | 26 | 55 |
G2-like 26 kAtPktilelmkvkgLtlehvkSHLQkYRl 55 +A+Pk+ilelm+v+gLt+e+v+SHLQkYR Dca32558.1 6 EAVPKKILELMNVPGLTRENVASHLQKYRQ 35 69***************************5 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
TIGRFAMs | TIGR01557 | 4.1E-13 | 6 | 35 | IPR006447 | Myb domain, plants |
Gene3D | G3DSA:1.10.10.60 | 8.7E-14 | 6 | 38 | IPR009057 | Homeodomain-like |
SuperFamily | SSF46689 | 1.43E-7 | 7 | 38 | IPR009057 | Homeodomain-like |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 206 aa Download sequence Send to blast |
MVVNVEAVPK KILELMNVPG LTRENVASHL QKYRQCHKQL ERPFLQKRGN KVKLIPLQEQ 60 SHISISPTNG HPNIQTQTQV ISTSSLQVRS FPTQIDLYGN HETLKHMTHA MKIQAMSNES 120 MVFGENSSSK TDMNMAIVKH VEGSNVIYHP WSTTFSREDN VNKEATSFFA REQCVNYGYG 180 YENLLDLGYN DAPFCFEQID HNSYAH |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G16857.2 | 2e-12 | response regulator 1 |