PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | DCAR_031282 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Apiales; Apiineae; Apiaceae; Apioideae; Scandiceae; Daucinae; Daucus
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Family | GeBP | ||||||||
Protein Properties | Length: 122aa MW: 13915 Da PI: 10.3858 | ||||||||
Description | GeBP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF573 | 71.9 | 1.2e-22 | 11 | 104 | 4 | 97 |
DUF573 4 qrlwseeDeivlLqGlidfkaktgkspsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkep.sfskehdqkifelskkiWg 97 ++++++Dei lL+ +i +k+++ ++++d+ +f +fvk +sf +sk+q+ Ki+rL+ Kf+++ k+ k+gk+p ++h+ + ++lskkiW DCAR_031282 11 TKVFTQKDEIKLLKSMIRYKSEKSRDATSDLADFTDFVK-PLSFPASKTQVGGKIQRLRTKFRNNFKREKHGKKPiGYFNKHQCQLYGLSKKIWA 104 689*********************************997.69**************************999998736789999***********6 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF04504 | 8.1E-21 | 12 | 103 | IPR007592 | Protein of unknown function DUF573 |
Sequence ? help Back to Top |
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Protein Sequence Length: 122 aa Download sequence Send to blast |
MEVMKSAPII TKVFTQKDEI KLLKSMIRYK SEKSRDATSD LADFTDFVKP LSFPASKTQV 60 GGKIQRLRTK FRNNFKREKH GKKPIGYFNK HQCQLYGLSK KIWATLVQVD SDDEEGVGND 120 N* |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
TrEMBL | A0A175YC27 | 1e-84 | A0A175YC27_DAUCS; Uncharacterized protein |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA13805 | 12 | 14 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G01370.1 | 8e-11 | DNA-binding storekeeper protein-related transcriptional regulator |
Link Out ? help Back to Top | |
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Phytozome | DCAR_031282 |