PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID DCAR_029642
Organism
Daucus carota
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Apiales; Apiineae; Apiaceae; Apioideae; Scandiceae; Daucinae; Daucus
Family bHLH
Protein Properties Length: 358aa    MW: 39732 Da    PI: 7.5753
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
DCAR_029642genomeARS-USDAView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH36.87.2e-12295340655
                  HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
          HLH   6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                  +++Er RR ri +++ +L++l P      +k  + a++L +AveYIk+Lq
  DCAR_029642 295 SIAERMRRTRISERMKKLQDLFPDM----DKQANTADMLDLAVEYIKDLQ 340
                  689*********************7....688*****************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088813.948289339IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474595.1E-14291351IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.05E-10293344No hitNo description
Gene3DG3DSA:4.10.280.101.3E-14294351IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000109.7E-9295340IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.8E-11295345IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 358 aa     Download sequence    Send to blast
MYTLTGSDSI PKELNNLFFS SNFNHKPENT SSYQGSSLSR YRSAPSSIFD ILLDEVKIDD  60
LKYGGDLKQE VVDLDGSDFF NVPDMGYVIS GQDSGVSSGD KAFSGLEELN QVKKNSGLIK  120
QSSSPAGYLS NLVAEIEFGA MSNLGGNYDA NKRTRTEVNT TASRLSNHVN FSSGSSSKSR  180
FMPHTTENYN ERIVTSCQQN GQLSSGQNRD WSGDSASTGL KRNRDGKVKM LSNINGLNNQ  240
SEASQHYSSG LLHQFSLPST SSEMEKIENL LHFQQDSGVP CRTRAKRGFA THPRSIAERM  300
RRTRISERMK KLQDLFPDMD KQANTADMLD LAVEYIKDLQ KEVKTLNETR DRCTCSR*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_017224260.10.0PREDICTED: transcription factor bHLH129-like
TrEMBLA0A175YEF80.0A0A175YEF8_DAUCS; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA44352238
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G51140.12e-45bHLH family protein