PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | DCAR_029513 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Apiales; Apiineae; Apiaceae; Apioideae; Scandiceae; Daucinae; Daucus
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Family | Dof | ||||||||
Protein Properties | Length: 295aa MW: 32033.8 Da PI: 7.9956 | ||||||||
Description | Dof family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-Dof | 75.9 | 5.3e-24 | 8 | 66 | 2 | 60 |
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkk 60 e++l+cprCds++tkf y+nn +sqPry Ck+C++ Wt+GG +r++ g r+ ++ DCAR_029513 8 MEQNLRCPRCDSEETKFAYFNNNKTSQPRYRCKSCKKLWTHGGQVRDISSNGEERRVNR 66 57899*******************************************98777776554 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
ProDom | PD007478 | 2.0E-13 | 9 | 66 | IPR003851 | Zinc finger, Dof-type |
Pfam | PF02701 | 8.0E-25 | 10 | 65 | IPR003851 | Zinc finger, Dof-type |
PROSITE profile | PS50884 | 21.502 | 12 | 66 | IPR003851 | Zinc finger, Dof-type |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 295 aa Download sequence Send to blast |
MANPSSEMEQ NLRCPRCDSE ETKFAYFNNN KTSQPRYRCK SCKKLWTHGG QVRDISSNGE 60 ERRVNRSRDS SPAIVSSAPP PPPLSSSMTS AGGIINETGR LNLTRPPPNH NQPPLKFVRM 120 DIQNLSIKPL EPPHDVGQNN IVQQNQQVLI ENYSQGFHAQ QTPRNPLDIA WGNQSFLNTT 180 HSSNYIEPNI NTFGNNPIGG STGGPSGSWG WSSAPVHLYI EPTNAHTFGE NNNGMGGPNS 240 NPSGLSSSAW SSSPPSYYIE PNNAWNNNNP TDGSARDPSG SSSGAWSSRA WSSN* |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_017224982.1 | 0.0 | PREDICTED: dof zinc finger protein DOF4.3-like | ||||
TrEMBL | A0A175YF58 | 0.0 | A0A175YF58_DAUCS; Uncharacterized protein |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G45610.1 | 7e-19 | Dof family protein |
Link Out ? help Back to Top | |
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Phytozome | DCAR_029513 |