PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID DCAR_023696
Organism
Daucus carota
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Apiales; Apiineae; Apiaceae; Apioideae; Scandiceae; Daucinae; Daucus
Family NAC
Protein Properties Length: 372aa    MW: 41590.4 Da    PI: 4.6496
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
DCAR_023696genomeARS-USDAView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM109.92.9e-34201522128
          NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvka.eekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk... 95 
                  ppGfrF+P d+el+ eyL k v +++ ++   i+ vd+y + P++L +k+++  e++wyfF+kr++ky+ g+r+nr + +g+Wk+t  +++v++    
  DCAR_023696  20 PPGFRFNPYDSELLEEYLLKLVYHENSPEGLGIPAVDLYCAAPQELTAKYEEhCENQWYFFTKRNRKYSGGNRPNRGAGNGFWKQTNVNRPVFKVlkd 117
                  8*************************999556**************9655552566********************99**************998876 PP

          NAM  96 .kgelvglkktLvfykg.rapkgektdWvmheyrl 128
                   ++ + g k tL ++++  +  g++tdW mheyr+
  DCAR_023696 118 kTKVELGRKVTLDYHDKsLKTAGQRTDWKMHEYRV 152
                  666679*********5537899***********97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019414.32E-3817183IPR003441NAC domain
PROSITE profilePS5100540.91419183IPR003441NAC domain
PfamPF023653.7E-1920152IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 372 aa     Download sequence    Send to blast
MENLEQLNSC NNSEEQDINP PGFRFNPYDS ELLEEYLLKL VYHENSPEGL GIPAVDLYCA  60
APQELTAKYE EHCENQWYFF TKRNRKYSGG NRPNRGAGNG FWKQTNVNRP VFKVLKDKTK  120
VELGRKVTLD YHDKSLKTAG QRTDWKMHEY RVNHKLPGLP SNYNTAGSSS ELDEWCLCRI  180
YISSRSGNKA DDAGANSEEE NEQEEVPTEA DATLIPQNTA PASNDQHFVA PQEYYGQNAG  240
GLDANSFPLS TNPLINDAFS NSSNSFYYAN TIDGQMNWMD YNNNFGLIDH VEIYPTADQL  300
HDNGFAQPIR SLPATGLPML PYSNFNQSSS SISGDFTSGQ GDGSLASVVY GNRQNSFNRG  360
STKVVFDHFG N*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A1e-271518110166Stress-induced transcription factor NAC1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_017216884.10.0PREDICTED: NAC transcription factor 29-like
TrEMBLA0A161ZI660.0A0A161ZI66_DAUCS; Uncharacterized protein
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G15170.13e-21NAC family protein