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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
DCAR_023351 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Apiales; Apiineae; Apiaceae; Apioideae; Scandiceae; Daucinae; Daucus
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Family |
GRAS |
Protein Properties |
Length: 477aa MW: 53158.1 Da PI: 5.4896 |
Description |
GRAS family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
DCAR_023351 | genome | ARS-USDA | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | GRAS | 247.8 | 4.2e-76 | 98 | 467 | 5 | 374 |
GRAS 5 LlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetsekn.sseelaalkl....fsevsPilkfshlt 97
Ll+ A+ v+++++++a++lL+ s+las +g+p+qRl+ yf++AL++r+ r+ +++ + +++ +e++ ++k + + P +
DCAR_023351 98 LLSSADKVANEQFSRARKLLSMCSHLASHTGNPVQRLVYYFAQALKERIDRKIGIISSEGREDCKRWLLnLDEAIISFKPpllaYGIAIPSCLAYKSA 195
8999***********************************************88888887776666665458888888876777688899999999999 PP
GRAS 98 aNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegpp.slRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledleleeL 194
qaIl+ +++++r+H iD++i +G++Wp L+qaLa R e p +l iT+++ +s+ ++ etg+rL++fA++lg+pf+f+++++++++dl+ +++
DCAR_023351 196 GIQAILDPMATATRIHLIDLGIRNGMHWPFLMQALAVRHECPLeTLTITALVT---SSEVMIMETGKRLSQFASTLGLPFSFKAVLVSDMNDLKEDSF 290
99************************************966544********9...57999************************************* PP
GRAS 195 rvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgr 292
++++gE + + +++ l + + ++ + e+ +++++k+l P+v+v+veqead+ s++F++rf+ l +ysa+fdsl+ + + +r+ +E+ ++g
DCAR_023351 291 KIESGERIGIYSSFILRNYVGQHEQFEN----LMRIIKNLHPTVMVMVEQEADTKSPEFMDRFTGGLIHYSAMFDSLDICFDGSHPQRMPLEEDYFGA 384
*******************988888888....****************************************************************** PP
GRAS 293 eivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveeesgslvlgWkdrpLvsvSaWr 374
i+++v+ +er + + Wr+ l+++ + ls++a qa+ ++++ + s ++ + ++l+ gW++ p++s+S+W+
DCAR_023351 385 GIRQIVTFDVEERASLDMKIKDWRALLNSFNIVEKDLSSSALYQANIVIENSElSSLCTLSMDGKCLLSGWRGTPIFSLSVWK 467
*****************************************************9999*************************8 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 477 aa
Download sequence Send
to blast |
MDATNESSSL GSLELLSTFG CRLKRLRVEQ GNDTSNNAVS GPNRKDLSTS DIVKVAMDKF 60 RGLTAQSCSD PCMLVHSSNG YSGLYSEIDD DVESVLFLLS SADKVANEQF SRARKLLSMC 120 SHLASHTGNP VQRLVYYFAQ ALKERIDRKI GIISSEGRED CKRWLLNLDE AIISFKPPLL 180 AYGIAIPSCL AYKSAGIQAI LDPMATATRI HLIDLGIRNG MHWPFLMQAL AVRHECPLET 240 LTITALVTSS EVMIMETGKR LSQFASTLGL PFSFKAVLVS DMNDLKEDSF KIESGERIGI 300 YSSFILRNYV GQHEQFENLM RIIKNLHPTV MVMVEQEADT KSPEFMDRFT GGLIHYSAMF 360 DSLDICFDGS HPQRMPLEED YFGAGIRQIV TFDVEERASL DMKIKDWRAL LNSFNIVEKD 420 LSSSALYQAN IVIENSELSS LCTLSMDGKC LLSGWRGTPI FSLSVWKFIP DIPKLC*
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3D Structure ? help Back to Top |
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PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
5hyz_A | 4e-34 | 98 | 467 | 8 | 375 | GRAS family transcription factor containing protein, expressed |