PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID DCAR_022387
Organism
Daucus carota
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Apiales; Apiineae; Apiaceae; Apioideae; Scandiceae; Daucinae; Daucus
Family NAC
Protein Properties Length: 419aa    MW: 48175.1 Da    PI: 4.3743
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
DCAR_022387genomeARS-USDAView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM46.11.5e-14161453128
          NAM   3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykve..PwdLpk......kvka.eekewyfFskrdkkyatgkrknratksgyWkatgkdke 91 
                  +Gf F+P+ +e+  +yLk+k+eg+kl++++ + + ++y+ +  Pw+  k       +++ ++k +y F++ +kk   g+r  r++  g+W+ + ++  
  DCAR_022387  16 KGFIFEPSAQEICENYLKNKIEGEKLRCKHLLFDENMYEDHstPWEVFKsddprwLINNkSKKVMYVFTNLKKK---GERVLRKAGCGTWSGQNRKAV 110
                  7***************************888999999976434***9644677774444144466999988775...789***99******8877444 PP

          NAM  92 vlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                    +++++ vg  +  +f +++ ++    +W+mhe +l
  DCAR_022387 111 QNEQGDAIVGYDRLHTFKTKEVED--GGNWTMHECTL 145
                  444466667887777777555555..69******765 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100518.51614160IPR003441NAC domain
PfamPF023652.1E-1116143IPR003441NAC domain
SuperFamilySSF1019414.05E-1316159IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 419 aa     Download sequence    Send to blast
MDKSGCEVCI LEFAKKGFIF EPSAQEICEN YLKNKIEGEK LRCKHLLFDE NMYEDHSTPW  60
EVFKSDDPRW LINNKSKKVM YVFTNLKKKG ERVLRKAGCG TWSGQNRKAV QNEQGDAIVG  120
YDRLHTFKTK EVEDGGNWTM HECTLHPKDY NCAVCKVLRE EEVVDQQPSQ EFPTASTDDN  180
VAHEDMHQED LEWGSFAETL ENIILQQPEE SGEACNENIN NIGSDQFPTA STDDNQPEES  240
GEACNEINVN NIGSDQLPIE IDDDNVGNEN MINIIAKPQG SVDTPTEKYH ADHDLPSDPI  300
SELFRDYEEP RDVQCHCHDD SSQVLVAEQA QQSESMALVI HLAENFDYYY KEQQQQERMA  360
FILHLAENFD YYYKEQQQQQ LQGGLKNLPG KRKNCDYDEE ESRSKKKQKQ QPFLCSLQ*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A164VF220.0A0A164VF22_DAUCS; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA1948623
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G46590.12e-08NAC domain containing protein 96