PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | DCAR_021811 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Apiales; Apiineae; Apiaceae; Apioideae; Scandiceae; Daucinae; Daucus
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Family | NAC | ||||||||
Protein Properties | Length: 191aa MW: 22124.1 Da PI: 8.5843 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 77.2 | 3.7e-24 | 16 | 128 | 1 | 109 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikev.diykvePwdLpkkvkaeekewyfFskrdkkyatgkrknr...atksgyWkatgkdkevls 94 lp+GfrF+Ptdeel+ +yL +k+++ +l++ +i+++ +i++++P++Lp v e++ y+F+kr+ y++ r++ + +s+yWk+ gk++++ + DCAR_021811 16 LPVGFRFRPTDEELILYYLMPKAQSLPLPA-AFIPQIdEIFQSHPSHLPGDV---EQRRYYFCKRSWDYSKTCRSRInyiSNESSYWKQAGKERAISV 109 79***************************9.78999977**********554...5678********99975544442144779**********9998 PP NAM 95 k....kgelvglkktLvfy 109 ++ +vg+kk + f DCAR_021811 110 DvahrRSIVVGTKKLFDFD 128 777667778*****99985 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 8.89E-26 | 13 | 136 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 23.99 | 16 | 171 | IPR003441 | NAC domain |
Pfam | PF02365 | 1.1E-13 | 17 | 131 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 191 aa Download sequence Send to blast |
MEKNCIVGRN GEELQLPVGF RFRPTDEELI LYYLMPKAQS LPLPAAFIPQ IDEIFQSHPS 60 HLPGDVEQRR YYFCKRSWDY SKTCRSRINY ISNESSYWKQ AGKERAISVD VAHRRSIVVG 120 TKKLFDFDNW VAYRVYQRKR NGRVKNTREN TKKMDVAEGV EMMSINNATE VESSPLPSPL 180 CSSNDEETFL * |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_017255574.1 | 1e-137 | PREDICTED: NAC domain-containing protein 41 | ||||
TrEMBL | A0A164VT84 | 1e-141 | A0A164VT84_DAUCS; Uncharacterized protein |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G14000.1 | 6e-25 | NAC domain containing protein 84 |
Link Out ? help Back to Top | |
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Phytozome | DCAR_021811 |