PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | DCAR_020448 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Apiales; Apiineae; Apiaceae; Apioideae; Scandiceae; Daucinae; Daucus
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Family | ERF | ||||||||
Protein Properties | Length: 227aa MW: 24825.7 Da PI: 5.1795 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 43.6 | 7.1e-14 | 33 | 73 | 11 | 54 |
AP2 11 krgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkle 54 ++g+WvAeIr p++ +kr++lg+++tae Aa+a++ a +++ DCAR_020448 33 RDGKWVAEIRIPKT---KKRIWLGSHDTAEAAAQAYDDASFCIY 73 57*********954...5********************988876 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51032 | 17.675 | 22 | 82 | IPR001471 | AP2/ERF domain |
SMART | SM00380 | 2.2E-24 | 26 | 88 | IPR001471 | AP2/ERF domain |
CDD | cd00018 | 3.63E-24 | 27 | 84 | No hit | No description |
SuperFamily | SSF54171 | 3.86E-15 | 27 | 83 | IPR016177 | DNA-binding domain |
Gene3D | G3DSA:3.30.730.10 | 8.0E-21 | 27 | 83 | IPR001471 | AP2/ERF domain |
Pfam | PF00847 | 1.3E-7 | 33 | 73 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 227 aa Download sequence Send to blast |
MELPKKTDGS SSSTPQTAGA KRLRGPYRGA RLRDGKWVAE IRIPKTKKRI WLGSHDTAEA 60 AAQAYDDASF CIYGVEGPCN FPNNRRPQVA SQLIGSKSTE EIRRIVEQST SAGAAKVSDT 120 KSPSKLSAAC HLINRPVVQD QLDLSGTAAH KTCPEPVVTS NVSEVERHVT ELDFTGNASE 180 VEPYIPTFSP EEPPLPWENL PFDEAFIKES DDWILDFMAE PATQKD* |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_017255136.1 | 1e-168 | PREDICTED: ethylene-responsive transcription factor ERF015-like | ||||
Refseq | XP_017255137.1 | 1e-168 | PREDICTED: ethylene-responsive transcription factor ERF015-like | ||||
Refseq | XP_017255138.1 | 1e-168 | PREDICTED: ethylene-responsive transcription factor ERF015-like | ||||
Refseq | XP_017255139.1 | 1e-168 | PREDICTED: ethylene-responsive transcription factor ERF015-like | ||||
TrEMBL | A0A161WUB6 | 1e-167 | A0A161WUB6_DAUCS; Uncharacterized protein |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA18774 | 2 | 3 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G31060.1 | 6e-16 | ERF family protein |
Link Out ? help Back to Top | |
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Phytozome | DCAR_020448 |