PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | DCAR_019969 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Apiales; Apiineae; Apiaceae; Apioideae; Scandiceae; Daucinae; Daucus
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Family | WRKY | ||||||||
Protein Properties | Length: 148aa MW: 16480.5 Da PI: 5.6619 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 33.8 | 6.6e-11 | 123 | 145 | 1 | 23 |
---SS-EEEEEEE--TT-SS-EE CS WRKY 1 ldDgynWrKYGqKevkgsefprs 23 ldDgy+WrKYG+K+vk++++pr+ DCAR_019969 123 LDDGYKWRKYGKKMVKSNPNPRQ 145 59*******************96 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:2.20.25.80 | 1.1E-10 | 110 | 145 | IPR003657 | WRKY domain |
SuperFamily | SSF118290 | 9.02E-9 | 116 | 144 | IPR003657 | WRKY domain |
PROSITE profile | PS50811 | 13.574 | 118 | 147 | IPR003657 | WRKY domain |
Pfam | PF03106 | 8.1E-7 | 124 | 145 | IPR003657 | WRKY domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 148 aa Download sequence Send to blast |
MSMSTLLVPL IQTPGSNPNP SMINSCVNDN RDDLGFDFSD YLALEDDYSC NLSSFLSDSA 60 PVILQDNLQT SAESSMNSNP DDVDNSHDHH LLQIKKCSKR MKCTGGDKGS RIAFRMKTEL 120 EVLDDGYKWR KYGKKMVKSN PNPRQVL* |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_017255689.1 | 1e-103 | PREDICTED: probable WRKY transcription factor 75 | ||||
TrEMBL | A0A164X3S9 | 1e-104 | A0A164X3S9_DAUCS; Uncharacterized protein |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA2124 | 24 | 62 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G26170.1 | 9e-15 | WRKY DNA-binding protein 50 |
Link Out ? help Back to Top | |
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Phytozome | DCAR_019969 |