PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | DCAR_019685 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Apiales; Apiineae; Apiaceae; Apioideae; Scandiceae; Daucinae; Daucus
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Family | SAP | ||||||||
Protein Properties | Length: 79aa MW: 8145.95 Da PI: 6.5134 | ||||||||
Description | SAP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SAP | 69.3 | 5.9e-22 | 8 | 71 | 18 | 81 |
SAP 18 ggeggdassgesegpsssrqr.aanevwpePflealatqvaidasrslGrlaaasalanvfqvcs 81 g +g+a +g++++psssrqr + n+vwpePf+ealat+vai+as+s Grl aa+ l+n+fq++ DCAR_019685 8 PG-DGGARGGDYDAPSSSRQRrSGNGVWPEPFVEALATHVAIEASQSEGRLVAAQVLFNLFQLAR 71 22.2345558999**999998799**************************************875 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 79 aa Download sequence Send to blast |
MSSPSSSPGD GGARGGDYDA PSSSRQRRSG NGVWPEPFVE ALATHVAIEA SQSEGRLVAA 60 QVLFNLFQLA RGSHSIMT* |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_017251479.1 | 2e-39 | PREDICTED: transcriptional regulator STERILE APETALA isoform X1 | ||||
TrEMBL | A0A164ZUT5 | 6e-49 | A0A164ZUT5_DAUCS; Uncharacterized protein | ||||
STRING | evm.model.supercontig_211.21 | 1e-17 | (Carica papaya) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA15887 | 5 | 6 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G35770.1 | 1e-09 | SAP family protein |
Link Out ? help Back to Top | |
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Phytozome | DCAR_019685 |