PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | DCAR_018636 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Apiales; Apiineae; Apiaceae; Apioideae; Scandiceae; Daucinae; Daucus
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Family | ERF | ||||||||
Protein Properties | Length: 226aa MW: 25699.8 Da PI: 10.1016 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 38.6 | 2.7e-12 | 113 | 154 | 3 | 51 |
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaark 51 +GV++ k + rW A I++ +k+++lg+ g+ eeAa+++++a+ DCAR_018636 113 MRGVYY-K-NMRWQAAIKVE-----KKQIHLGTVGSQEEAARLYDRAAF 154 79**96.5.7*********6.....6********************985 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51032 | 9.137 | 84 | 167 | IPR001471 | AP2/ERF domain |
Pfam | PF00847 | 2.1E-6 | 112 | 155 | IPR001471 | AP2/ERF domain |
SuperFamily | SSF54171 | 6.21E-8 | 112 | 157 | IPR016177 | DNA-binding domain |
SMART | SM00380 | 7.0E-5 | 112 | 169 | IPR001471 | AP2/ERF domain |
Gene3D | G3DSA:3.30.730.10 | 2.2E-6 | 114 | 159 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 226 aa Download sequence Send to blast |
MVSIRRRRLL GLSSGRSSIE DPLPKTSDNG HNPETPMKNS RASSVHPVPF IDIDQVKEND 60 ASEVHSGSSN VSIPSSSKEQ HHKKFSGIST VVEFKRRKRY RRKQIGNQEP CIMRGVYYKN 120 MRWQAAIKVE KKQIHLGTVG SQEEAARLYD RAAFMCGREP NFELSEKDKE ALRKLSWEEY 180 LAMTRSEINS KRHERRTRGR SSRKVDTIDS GYCDVDEGSI SGSED* |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_017251941.1 | 1e-167 | PREDICTED: ethylene-responsive transcription factor-like protein At4g13040 | ||||
TrEMBL | A0A164Z629 | 1e-165 | A0A164Z629_DAUCS; Uncharacterized protein | ||||
STRING | XP_010242670.1 | 1e-76 | (Nelumbo nucifera) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA6246 | 24 | 33 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G13040.2 | 6e-44 | ERF family protein |
Link Out ? help Back to Top | |
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Phytozome | DCAR_018636 |