PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID DCAR_017224
Organism
Daucus carota
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Apiales; Apiineae; Apiaceae; Apioideae; Scandiceae; Daucinae; Daucus
Family BES1
Protein Properties Length: 315aa    MW: 33943.1 Da    PI: 9.1157
Description BES1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
DCAR_017224genomeARS-USDAView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF822211.22.7e-6551491149
       DUF822   1 ggsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpleeaeaagssasaspesslqssl 98 
                  g++gr ptwkErEnnkrRERrRRai+akiyaGLRaqGn+klpk++DnneVlkALc+eAGw+v++DGttyrkg+kp+  +  +g+ +++s +ss+q s+
  DCAR_017224   5 GATGRLPTWKERENNKRRERRRRAISAKIYAGLRAQGNFKLPKHCDNNEVLKALCNEAGWIVQEDGTTYRKGCKPPPGEILTGTPTNMSACSSMQPSP 102
                  5899************************************************************************8888899999************ PP

       DUF822  99 kssalaspvesysaspksssfpspssldsislasaasllpvlsvlslvsss 149
                   ssa++sp++sy+asp+sssfpsp++  + s    + +lp+l +l++++ss
  DCAR_017224 103 MSSAFPSPAPSYHASPTSSSFPSPTRETNPS----SYILPFLCNLAAIPSS 149
                  *************************966553....4688888888877776 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF056871.7E-627130IPR008540BES1/BZR1 plant transcription factor, N-terminal
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009742Biological Processbrassinosteroid mediated signaling pathway
GO:0045892Biological Processnegative regulation of transcription, DNA-templated
GO:0048316Biological Processseed development
GO:0048481Biological Processplant ovule development
GO:0005634Cellular Componentnucleus
GO:0005829Cellular Componentcytosol
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 315 aa     Download sequence    Send to blast
MTAGGATGRL PTWKERENNK RRERRRRAIS AKIYAGLRAQ GNFKLPKHCD NNEVLKALCN  60
EAGWIVQEDG TTYRKGCKPP PGEILTGTPT NMSACSSMQP SPMSSAFPSP APSYHASPTS  120
SSFPSPTRET NPSSYILPFL CNLAAIPSSL PPLRISNSAP VTPPLSSPTA RGSKRPEWEL  180
PTNNSMLFRH PLFAASAPAS PTRRHHHHHF TPATIPECDE SDASTVDSGR WVSFQPSPSQ  240
AVPTSPTFNL VKPVAHQIGA VDTHGGLGWG AAAKRARGPE FEFESCTVRA WEGERIHEVG  300
VDDLELTLGS GKAH*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5zd4_A8e-28984372447Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_B8e-28984372447Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_C8e-28984372447Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_D8e-28984372447Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00237DAPTransfer from AT1G75080Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_017253773.10.0PREDICTED: BES1/BZR1 homolog protein 2
SwissprotQ94A431e-109BEH2_ARATH; BES1/BZR1 homolog protein 2
TrEMBLA0A161YKM10.0A0A161YKM1_DAUCS; Uncharacterized protein
STRINGXP_009349751.11e-142(Pyrus x bretschneideri)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA94862128
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75080.24e-89BES1 family protein