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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
DCAR_014105 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Apiales; Apiineae; Apiaceae; Apioideae; Scandiceae; Daucinae; Daucus
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| Family |
GRAS |
| Protein Properties |
Length: 509aa MW: 56637.6 Da PI: 4.9797 |
| Description |
GRAS family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| DCAR_014105 | genome | ARS-USDA | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | GRAS | 320.1 | 4.7e-98 | 123 | 502 | 1 | 374 |
GRAS 1 lvelLlecAeavssgdle..laqalLarlselaspdg.dpmqRlaayfteALaarlarsvselykal...ppsetseknsseelaalklfsevsPilk 92
lv+lL+++Aea++ +++ la+ +L rl+el+sp++ ++m+Rlaayft+AL+ l +++s+ + l p + +e++ +++laa++l++++sP++k
DCAR_014105 123 LVHLLMAAAEAMTGVNKSrdLARVILIRLKELVSPTQgTNMERLAAYFTQALQGLLEGTGSKNNNVLlngPYHNRDEHQATDTLAAFQLLQDMSPYVK 220
68***********96665559***********888665********************99888888743344445555599***************** PP
GRAS 93 fshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegpp..slRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrl 186
f+h+taNqaIleav +++r+Hi+D+di++G+QW++++q+L sR++gpp +lRiT++++ g s ++++etg+rL+ fA+++g pf+f+ ++
DCAR_014105 221 FGHFTANQAILEAVTNDKRIHIVDYDIMEGIQWASFMQSLVSRKDGPPgpHLRITALSRGGGGkrSITSVQETGRRLTAFAASIGQPFSFHQSKLDAD 318
********************************************887767*********66558899*************************888899 PP
GRAS 187 edleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqe....adhnsesFlerflealeyysalfdsleaklprese 280
e++++++L++ +gEal++n++l+l ++ +s ++ ++L+ k+l P++v++ve+e ++++ F+ rf+e+l+ ysal+dslea++p + +
DCAR_014105 319 ESFKPSSLKLVRGEALIINCMLHLPHFSYRSPDSVV---SFLSGAKTLDPRLVTLVEEEeeaePTTDEGGFVSRFMESLHRYSALYDSLEAGFPMQGR 413
99*************************977776666...9****************99944222336779**************************** PP
GRAS 281 erikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveee.sgslvlgWkdrpLvsvSaWr 374
+r+ vEr++lg++i + ++ ++ + ++ l +GF+ +++s + +qaklll ++ dgyrvee s+ lvlgWk+r+L+s+S W+
DCAR_014105 414 ARALVERVFLGPRIAGSLNRIYRD-----TEICSLSNYLCGMGFQRANISFANHCQAKLLLGLFN-DGYRVEELaSNKLVLGWKSRRLLSASIWT 502
**************9988776666.....6788899*****************************.******876999****************6 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 509 aa
Download sequence Send
to blast |
MAMVIDDDFH EFYFPDYCNT ATTTTTTTTT TSASEDELCN WNDWSPLMDW EALSNGHDQD 60
FNGLFESIMD DDSASLSQLQ SSPELQQHPS PQPHEHSSPE LMMISHDPEE ITNNSEDTKG 120
LRLVHLLMAA AEAMTGVNKS RDLARVILIR LKELVSPTQG TNMERLAAYF TQALQGLLEG 180
TGSKNNNVLL NGPYHNRDEH QATDTLAAFQ LLQDMSPYVK FGHFTANQAI LEAVTNDKRI 240
HIVDYDIMEG IQWASFMQSL VSRKDGPPGP HLRITALSRG GGGKRSITSV QETGRRLTAF 300
AASIGQPFSF HQSKLDADES FKPSSLKLVR GEALIINCML HLPHFSYRSP DSVVSFLSGA 360
KTLDPRLVTL VEEEEEAEPT TDEGGFVSRF MESLHRYSAL YDSLEAGFPM QGRARALVER 420
VFLGPRIAGS LNRIYRDTEI CSLSNYLCGM GFQRANISFA NHCQAKLLLG LFNDGYRVEE 480
LASNKLVLGW KSRRLLSASI WTSPEQDL*
|
| Functional Description ? help
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| Source |
Description |
| UniProt | Transcriptional regulator essential for Nod-factor-induced gene expression. Acts downstream of calcium spiking and DMI3, a calcium/calmodulin-dependent protein kinase (CCaMK). {ECO:0000269|PubMed:15961668}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: Induced 24 hours after treatment with Nod factor or Sinorhizobium meliloti. {ECO:0000269|PubMed:15961668}. |
