PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID DCAR_013560
Organism
Daucus carota
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Apiales; Apiineae; Apiaceae; Apioideae; Scandiceae; Daucinae; Daucus
Family bZIP
Protein Properties Length: 408aa    MW: 44978.4 Da    PI: 8.9753
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
DCAR_013560genomeARS-USDAView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_135.71.8e-11115155545
                  CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
       bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaL 45 
                  k  rr+++NReAAr+sR+RKka++++Le    +L++  ++L
  DCAR_013560 115 KTLRRLAQNREAARKSRLRKKAYVQQLESSRMKLTQLEQDL 155
                  7789************************9988888877766 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1706.6E-9109157No hitNo description
SMARTSM003385.6E-9111174IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.289113157IPR004827Basic-leucine zipper domain
SuperFamilySSF579593.06E-7115157No hitNo description
PfamPF001708.2E-9115156IPR004827Basic-leucine zipper domain
CDDcd147084.74E-22115165No hitNo description
PROSITE patternPS000360118133IPR004827Basic-leucine zipper domain
PfamPF141441.0E-31207281IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 408 aa     Download sequence    Send to blast
MTPNLLPSLL NNSGMRPPTL NIFPSQPMHV DPSASKLQGS NMGLVSPATS GSKRSSEPSM  60
ELSNTKTEHP PPRPPTSAVG PPPPKAVKRE GNNGAGRRGL TSSSEHDGPK TPDPKTLRRL  120
AQNREAARKS RLRKKAYVQQ LESSRMKLTQ LEQDLQRARA QGAFMGGGGA LLGAEQGLPL  180
GMGNLSSDAV VFDMDYGRWL EEHHRLMCEL RAAVQEHLPD NELQLYVDHC LAHFDEVMNL  240
KSMLAKTDVF HLVSGNWKTP AERCFMWMGG FRPSELIKII VNQIEPLTEQ QLMGICGLQQ  300
STQEAEEALS QGLDALNQSL SDVIVSDSLS SPPNMANYMG QMAMAMSKLS TLEGFVRQAD  360
SLRHQTIHRL HQLLTVRQAA RCLLAIAEYF HRLRALSSLW VARPRQD*
Functional Description ? help Back to Top
Source Description
UniProtTranscription activator that binds to as1-like elements (5'-TGACGTAAgggaTGACGCA-3') in promoters of target genes. Regulates transcription in response to plant signaling molecules salicylic acid (SA), methyl jasmonate (MJ) and auxin (2,4D) only in leaves. Prevents lateral branching and may repress defense signaling. {ECO:0000269|PubMed:12777042}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00491DAPTransfer from AT5G06839Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_017244846.10.0PREDICTED: transcription factor TGA2-like
SwissprotQ52MZ20.0TGA10_TOBAC; bZIP transcription factor TGA10
TrEMBLA0A165YHB70.0A0A165YHB7_DAUCS; Uncharacterized protein
STRINGXP_009611363.10.0(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA22792145
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06839.31e-170bZIP family protein