PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID DCAR_012752
Organism
Daucus carota
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Apiales; Apiineae; Apiaceae; Apioideae; Scandiceae; Daucinae; Daucus
Family NAC
Protein Properties Length: 322aa    MW: 35625 Da    PI: 4.7497
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
DCAR_012752genomeARS-USDAView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM39.71.5e-126011473128
          NAM  73 rknratksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                  + ++ t+ g Wk+ g+  e+++ ++ l+g ++t  f++g++p+ +kt+Wvm+ey++
  DCAR_012752  60 EVKKDTQLGSWKENGEPCEIFT-NSVLTGWRTTYEFFEGQSPNEKKTNWVMQEYKI 114
                  44567899**************.99*****************************86 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100520.3534137IPR003441NAC domain
SuperFamilySSF1019413.4E-1910136IPR003441NAC domain
PfamPF023653.0E-613114IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 322 aa     Download sequence    Send to blast
MSPPNPPVPF SSWTDEMITL SLEDYNQGKP PPQYLLSDLN PYSYLPSNLP DGIGYLLSSE  60
VKKDTQLGSW KENGEPCEIF TNSVLTGWRT TYEFFEGQSP NEKKTNWVMQ EYKITHKGPG  120
DGSKSKDYGS LCRILQSKKS IPEGINMISL PKSNSTGGQG SKNEAQEIGD VEAILLTSAE  180
RHNCALRGDF LELDDLADPQ SPFSTSFNSS CPTLASEELF DSDMLLQELD DKRIDRKEQF  240
KYTVSSTVKP NEVVMRPAIV GKLTTEEPMK SNCYIPALVV GGENASASSG HPGAVYEKRK  300
EKKGVSGQIK KLQNFFCFDL F*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_017246905.10.0PREDICTED: NAC domain-containing protein 41-like
RefseqXP_017246906.10.0PREDICTED: NAC domain-containing protein 41-like
RefseqXP_017246907.10.0PREDICTED: NAC domain-containing protein 41-like
TrEMBLA0A165ZCX50.0A0A165ZCX5_DAUCS; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA112072123
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G10500.11e-11NAC domain containing protein 53