PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | DCAR_012697 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Apiales; Apiineae; Apiaceae; Apioideae; Scandiceae; Daucinae; Daucus
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Family | NAC | ||||||||
Protein Properties | Length: 201aa MW: 22913.9 Da PI: 4.3213 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 69.7 | 7.7e-22 | 21 | 144 | 1 | 127 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykv.ePwdLp.kkvka.eekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 lppG+ F P+ +l+ eyL +k+ + ++ +++k +d +++ +P +L+ +++k ++ke y+ +k+++++a++k + +t +g Wk+ ++ ++ + DCAR_012697 21 LPPGYYFLPSAAQLIEEYLLQKILDLPMAS-NIVKIMDFVELiDPDQLNlEEFKYcKDKEGYYITKKAERKANEK-TIIKTLTGHWKEYKSNIPISN- 115 79*************************988.7778888777559***9854444337889999999999988754.4456788************99. PP NAM 96 kgelvglkktLvfykgrapkgektdWvmheyr 127 +++ vg k t++fy + +g++t W ++ey+ DCAR_012697 116 NSQIVGYKSTFTFY---QADGTETAWKLNEYT 144 999***********...678889********7 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 1.7E-21 | 20 | 174 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 24.17 | 21 | 174 | IPR003441 | NAC domain |
Pfam | PF02365 | 5.0E-12 | 22 | 144 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 201 aa Download sequence Send to blast |
MSNNLPAAAK VIVEEEIGDS LPPGYYFLPS AAQLIEEYLL QKILDLPMAS NIVKIMDFVE 60 LIDPDQLNLE EFKYCKDKEG YYITKKAERK ANEKTIIKTL TGHWKEYKSN IPISNNSQIV 120 GYKSTFTFYQ ADGTETAWKL NEYTSNPDIV PVDALTDTVR AKIEEYVACR IHIKKVKLAE 180 QVIYNEETVK DEDEDEDGEE * |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_017240989.1 | 1e-145 | PREDICTED: NAC domain-containing protein 105-like | ||||
TrEMBL | A0A166CIK7 | 1e-144 | A0A166CIK7_DAUCS; Uncharacterized protein |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA15132 | 6 | 8 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G33480.1 | 1e-17 | NAC domain containing protein 41 |
Link Out ? help Back to Top | |
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Phytozome | DCAR_012697 |