PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID DCAR_011542
Organism
Daucus carota
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Apiales; Apiineae; Apiaceae; Apioideae; Scandiceae; Daucinae; Daucus
Family ERF
Protein Properties Length: 269aa    MW: 30548.4 Da    PI: 4.6195
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
DCAR_011542genomeARS-USDAView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP245.22.4e-143382255
          AP2  2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
                 +++GVr++k +g ++AeIrdp     + kr +lg+f t+eeA++ + a + +le+
  DCAR_011542 33 RFTGVRRRK-WGTYAAEIRDPI----QkKRLWLGTFPTEEEAYEVYRAKKVELEK 82
                 799***998.**********72....35********************9999986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000184.76E-173273No hitNo description
PROSITE profilePS5103216.9113392IPR001471AP2/ERF domain
SuperFamilySSF541712.62E-133382IPR016177DNA-binding domain
PfamPF008475.1E-73381IPR001471AP2/ERF domain
SMARTSM003801.2E-103395IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.104.3E-173381IPR001471AP2/ERF domain
PRINTSPR003671.5E-53445IPR001471AP2/ERF domain
PRINTSPR003671.5E-55672IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 269 aa     Download sequence    Send to blast
MYDSSEKCRS SAKVRGKDCK VEDDENKTTN EKRFTGVRRR KWGTYAAEIR DPIQKKRLWL  60
GTFPTEEEAY EVYRAKKVEL EKRIMLNKNN LSAASACASE DTTGLYSLPS PSSVLDVSNP  120
LQTANISGDV VKETAGTSLQ IVDRVQESTK ESMRLMRKLV LRDELPINEF EVDPVLSPFP  180
DHSCDMDSRD GFREPTVKEI FDIPFASLPI SDNLKCSFGE NMLDHVHILG DKFIQTEEPV  240
YYPDDQKLEL PLDPELGKEE FDWLNGNL*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_017238213.10.0PREDICTED: ethylene-responsive transcription factor ERF118-like
TrEMBLA0A166BRS40.0A0A166BRS4_DAUCS; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA127181519
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G49120.11e-17ERF family protein