PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | orange1.1g038974m | ||||||||
Common Name | CISIN_1g038974mg | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
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Family | NAC | ||||||||
Protein Properties | Length: 135aa MW: 15492.7 Da PI: 7.5306 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 71.7 | 1.9e-22 | 2 | 120 | 1 | 124 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleev.ikevdiykvePwdLpk.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdk 90 lppG+ F+Pt+e+ v yL kv+g++ + i++++++++ePw+L + +++ ++++yf + r ++y++ + r + g+Wk+ g + orange1.1g038974m 2 LPPGVVFNPTEEDRV-SYLIGKVSGHTDGGGSYfIQDIQLCEHEPWELLSlAHDCCHQQMYFTHLR-SRYHS-EMVYREAVCGFWKNLGLSS 90 79*************.9*********96665555**************741333344555655555.55654.567777788********** PP NAM 91 evlskkgelvglkktLvfykgrapkgektdWvmh 124 + +k+g+ v +kk+L +y +k +kt+W+m orange1.1g038974m 91 YINDKGGKPVAVKKSLNYY----KKDVKTQWLMT 120 *******************....45679*****6 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51005 | 20.659 | 2 | 134 | IPR003441 | NAC domain |
SuperFamily | SSF101941 | 8.24E-18 | 2 | 120 | IPR003441 | NAC domain |
Pfam | PF02365 | 6.9E-11 | 3 | 120 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 135 aa Download sequence Send to blast |
MLPPGVVFNP TEEDRVSYLI GKVSGHTDGG GSYFIQDIQL CEHEPWELLS LAHDCCHQQM 60 YFTHLRSRYH SEMVYREAVC GFWKNLGLSS YINDKGGKPV AVKKSLNYYK KDVKTQWLMT 120 CTHFCTITSI RHEN* |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
TrEMBL | A0A067D0I6 | 8e-98 | A0A067D0I6_CITSI; Uncharacterized protein |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Malvids | OGEM29602 | 2 | 2 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G76420.1 | 2e-13 | NAC family protein |
Link Out ? help Back to Top | |
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Phytozome | orange1.1g038974m |