PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID orange1.1g030079m
Common NameCISIN_1g027074mg
Organism
Citrus sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family NAC
Protein Properties Length: 184aa    MW: 21368.2 Da    PI: 6.4995
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
orange1.1g030079mgenomeICGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM43.41.1e-13298373128
                NAM  73 rknratksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                        ++n ++++g W+a+g++ e++s ++  +g ++tL f++g+ p+ +ktdWvm+e+r+
  orange1.1g030079m  29 KENTSAQHGQWRAKGETCEIFS-NSYIIGWRTTLEFFEGQVPNERKTDWVMQEFRI 83 
                        56667899**************.999****************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100520.0831106IPR003441NAC domain
PfamPF023651.3E-71383IPR003441NAC domain
SuperFamilySSF1019416.02E-1918106IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 184 aa     Download sequence    Send to blast
MMSILTTIGP QIYLNCNVPD GVWYLVCSKE NTSAQHGQWR AKGETCEIFS NSYIIGWRTT  60
LEFFEGQVPN ERKTDWVMQE FRITQKRLYG DKKEEDSSSL CRVFLSGKQS PNHEMQQKLF  120
SANINNETHS HSTELSFDKD KDDTRQVSII RHEVCQPQHS GLVFCLLEWI SCLNFVWFSL  180
IFK*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_024952496.11e-106NAC transcription factor 29-like isoform X3
TrEMBLA0A067H9Y21e-135A0A067H9Y2_CITSI; Uncharacterized protein
STRINGXP_006473456.18e-97(Citrus sinensis)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G12977.17e-14NAC family protein