PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | orange1.1g022011m | ||||||||
Common Name | CISIN_1g021624mg | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
|
||||||||
Family | bZIP | ||||||||
Protein Properties | Length: 305aa MW: 33045.5 Da PI: 10.6299 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 49.1 | 1.3e-15 | 232 | 284 | 5 | 57 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkeva 57 +r+rr++kNRe+A rsR+RK+a++ eLe +v++L++eN++L+k+ ee+ ++ + orange1.1g022011m 232 RRQRRMIKNRESAARSRARKQAYTMELEAEVAKLKEENEELRKKQEEMMEMQK 284 79*****************************************9999998865 PP |
Protein Features ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.20.5.170 | 2.1E-15 | 227 | 291 | No hit | No description |
SMART | SM00338 | 5.8E-14 | 228 | 292 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 11.668 | 230 | 281 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 3.0E-11 | 232 | 282 | No hit | No description |
Pfam | PF00170 | 1.6E-13 | 232 | 284 | IPR004827 | Basic-leucine zipper domain |
CDD | cd14707 | 1.69E-26 | 232 | 286 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 235 | 250 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
---|---|---|---|---|---|---|
GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0009738 | Biological Process | abscisic acid-activated signaling pathway | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding | ||||
GO:0044212 | Molecular Function | transcription regulatory region DNA binding |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 305 aa Download sequence Send to blast |
MPQAQRQQTL GEMTLEEFLV RAGVVREDLQ FGGGVGGKVN GNSGLFGDLS RSANNTGMGI 60 GFQQMGKGAS LMGNRNLETG NQINIQSSNL PLNVNGARMN QHPLAQQQHN QQTQQQPQQP 120 QIFPKQPAMA YATQMPLQSS PGIKSGIVVV GDQAMNGNLI QGGALQGGGM GMVGLGAPPV 180 GVSLGSPANQ LSSDGIGKSN GDTSSVSPVP YMFNGSLRGR RFNGNVEKVV ERRQRRMIKN 240 RESAARSRAR KQAYTMELEA EVAKLKEENE ELRKKQEEMM EMQKNQVKKL FSLFFFHLSE 300 KSLL* |
Expression -- UniGene ? help Back to Top | ||||||
---|---|---|---|---|---|---|
UniGene ID | E-value | Expressed in | ||||
Csi.8945 | 0.0 | callus| fruit| seed |
Expression -- Description ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Source | Description | |||||
Uniprot | TISSUE SPECIFICITY: Expressed in roots, leaves, flowers and siliques but not in seeds. {ECO:0000269|PubMed:11005831, ECO:0000269|PubMed:15361142, ECO:0000269|PubMed:16284313}. |
Functional Description ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Source | Description | |||||
UniProt | Involved in ABA and stress responses and acts as a positive component of glucose signal transduction. Functions as transcriptional activator in the ABA-inducible expression of rd29B. Binds specifically to the ABA-responsive element (ABRE) of the rd29B gene promoter. {ECO:0000269|PubMed:11005831, ECO:0000269|PubMed:15361142, ECO:0000269|PubMed:16284313, ECO:0000269|PubMed:16463099}. |
Regulation -- Description ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Source | Description | |||||
UniProt | INDUCTION: Up-regulated by drought, salt, abscisic acid (ABA), cold and glucose. {ECO:0000269|PubMed:10636868, ECO:0000269|PubMed:11005831, ECO:0000269|PubMed:15361142, ECO:0000269|PubMed:16284313, ECO:0000269|PubMed:16463099}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-value | Description | ||||
Refseq | XP_024039741.1 | 1e-175 | ABSCISIC ACID-INSENSITIVE 5-like protein 5 isoform X3 | ||||
Swissprot | Q9M7Q4 | 7e-82 | AI5L5_ARATH; ABSCISIC ACID-INSENSITIVE 5-like protein 5 | ||||
TrEMBL | A0A067GX07 | 0.0 | A0A067GX07_CITSI; Uncharacterized protein | ||||
STRING | XP_006473314.1 | 0.0 | (Citrus sinensis) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT1G45249.1 | 1e-57 | abscisic acid responsive elements-binding factor 2 |
Link Out ? help Back to Top | |
---|---|
Phytozome | orange1.1g022011m |
Publications ? help Back to Top | |||
---|---|---|---|
|