PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cucsa.120310.1
Organism
Cucumis sativus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Cucumis
Family SAP
Protein Properties Length: 377aa    MW: 42072.8 Da    PI: 6.317
Description SAP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cucsa.120310.1genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SAP604.23.1e-184137679454
             SAP  79 vcstwravsrsdllwqrltrriWrrtkllrdtWreeyiyrhrtarnfrtrrysyvtlqfdpadvdedndadalsCrclalsdkylaaGfadGavr 173
                     vcstwravsrs+llw+rlt riW rt++l dtWr+ey+y+h +arnfrt+r+ +++l++d++dvde   +d l+Crcla+s ++la+GfadG+vr
  Cucsa.120310.1   1 VCSTWRAVSRSELLWHRLTTRIWGRTYRLLDTWRDEYVYWHTIARNFRTGRSLHTVLRYDQSDVDE---PDGLMCRCLAISLRHLACGFADGTVR 92 
                     8*************************************************************9998...689*********************** PP

             SAP 174 lfdletrlhvstflpqhrdrlGrfsravsGiv.isdsrlvfatldGdihvavidgag..aaaarrallGdvvndGalvdfaGsgrWwvGlyaGvp 265
                     lfdl+trlh++tf+p+hrdrlG+fsravsGiv i+d+rlvfa++dGdihv +i  +    +++rr++ G+v+ndG+lvdfaG++rWwvGlyaGvp
  Cucsa.120310.1  93 LFDLATRLHITTFRPHHRDRLGQFSRAVSGIViIADARLVFASIDGDIHVGIIAPNPvaISPTRRVHEGNVMNDGVLVDFAGCDRWWVGLYAGVP 187
                     ******************************972579*****************765433789********************************* PP

             SAP 266 GrafhiWdaeteelvfvGGsltdPeavmGWhmlteltelvGrvrvteretavaCtslrlvvfdlrnqgvvlreeeerrGlivssldasneayvvv 360
                     GrafhiWd+++eelvfvGGsltdPe+v+GWhml+elte vGrvrv+++e+avaCtsl+l+v+dlrnq+vvl+eee+    iv+s+d+sne+y+vv
  Cucsa.120310.1 188 GRAFHIWDGNSEELVFVGGSLTDPESVTGWHMLAELTEQVGRVRVSNQESAVACTSLQLMVLDLRNQEVVLNEEENGVVRIVTSMDVSNETYIVV 282
                     ************************************************************************99999999*************** PP

             SAP 361 dsrGvatvrrvenleevcrfrvrg.aqrgvlgCvnggyalvyaggvlrvWeiekkegylyslrervgevnalvaddrhvavsssdgtihlldfga 454
                     d +Gva+vrrv+++eevc f+vrg a rgv+gC+n gya++ +gg +rvW+ie+ + y+  +rer+g +na+va+dr+va+s+ d+t+hl+dfga
  Cucsa.120310.1 283 DGNGVAIVRRVDTMEEVCTFTVRGaADRGVVGCINMGYAVMSSGGTIRVWDIEHGQ-YMCRFRERIGAANAIVANDRYVAASAFDTTLHLWDFGA 376
                     ************************99***************************966.************************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF813833.49E-5149IPR001810F-box domain
SuperFamilySSF509981.96E-1967375IPR011047Quinoprotein alcohol dehydrogenase-like superfamily
Gene3DG3DSA:2.130.10.107.7E-1678150IPR015943WD40/YVTN repeat-like-containing domain
Gene3DG3DSA:2.130.10.107.7E-16217374IPR015943WD40/YVTN repeat-like-containing domain
PROSITE profilePS502949.705324376IPR017986WD40-repeat-containing domain
PROSITE patternPS006780360374IPR019775WD40 repeat, conserved site
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009554Biological Processmegasporogenesis
GO:0009908Biological Processflower development
GO:0030163Biological Processprotein catabolic process
GO:0046622Biological Processpositive regulation of organ growth
GO:0005634Cellular Componentnucleus
GO:0005515Molecular Functionprotein binding
Sequence ? help Back to Top
Protein Sequence    Length: 377 aa     Download sequence    Send to blast
VCSTWRAVSR SELLWHRLTT RIWGRTYRLL DTWRDEYVYW HTIARNFRTG RSLHTVLRYD  60
QSDVDEPDGL MCRCLAISLR HLACGFADGT VRLFDLATRL HITTFRPHHR DRLGQFSRAV  120
SGIVIIADAR LVFASIDGDI HVGIIAPNPV AISPTRRVHE GNVMNDGVLV DFAGCDRWWV  180
GLYAGVPGRA FHIWDGNSEE LVFVGGSLTD PESVTGWHML AELTEQVGRV RVSNQESAVA  240
CTSLQLMVLD LRNQEVVLNE EENGVVRIVT SMDVSNETYI VVDGNGVAIV RRVDTMEEVC  300
TFTVRGAADR GVVGCINMGY AVMSSGGTIR VWDIEHGQYM CRFRERIGAA NAIVANDRYV  360
AASAFDTTLH LWDFGA*
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional regulator involved in the specification of floral identity. Acts as A class cadastral protein by repressing the C class floral homeotic gene AGAMOUS in the external flower organs in association with APETALA2 and other repressors. Is required to maintain floral meristem identity in concert with AGAMOUS. Interacts also with APETALA2 to ensure the normal development of ovule.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankLN6819170.0LN681917.1 Cucumis melo genomic scaffold, anchoredscaffold00085.
GenBankLN7132650.0LN713265.1 Cucumis melo genomic chromosome, chr_11.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011658402.10.0PREDICTED: LOW QUALITY PROTEIN: transcriptional regulator STERILE APETALA
SwissprotQ9FKH11e-150SAP_ARATH; Transcriptional regulator STERILE APETALA
TrEMBLA0A221SKY30.0A0A221SKY3_CUCSA; LittleLeaf protein (Fragment)
STRINGXP_004140070.10.0(Cucumis sativus)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF76873146
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G35770.11e-146SAP family protein
Publications ? help Back to Top
  1. Li N, et al.
    STERILE APETALA modulates the stability of a repressor protein complex to control organ size in Arabidopsis thaliana.
    PLoS Genet., 2018. 14(2): p. e1007218
    [PMID:29401459]