PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PK19672.1
Organism
Cannabis sativa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Cannabis
Family GeBP
Protein Properties Length: 237aa    MW: 27469.7 Da    PI: 8.396
Description GeBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PK19672.1genomeCCBRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF57368.91e-21147236389
     DUF573   3 fqrlwseeDeivlLqGlidfkaktgkspsd.didafye.fvkksisfkvsksqlveKirrLKkKfkkkvkk.aksgkepsfskehdqkif 89 
                 +r+wseeDei lLq ++d++ +++  p+    + fy+  vk ++  +++++ql +K+rr+++K++   +k ++sg +++f+++h++ if
  PK19672.1 147 QKRVWSEEDEIELLQSFLDYTVTRKLGPHRrTANSFYNdRVKPELRGRFNQNQLADKLRRMRRKYQITFSKlKNSGVDFRFRNPHERGIF 236
                68************************999978899*96379*************************999997899***********9998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF045044.3E-20148236IPR007592Protein of unknown function DUF573
Sequence ? help Back to Top
Protein Sequence    Length: 237 aa     Download sequence    Send to blast
XNLYQFSPSS STISNLHLPS AIGGEKTKKK KKKKERPCSF SIDKKTIMTW PLVSWLLSSS  60
SSSSTSSSEY DNEDIFDEPD INDPKSTNDD DDHDHNQEDD YDGVDSVTVA VTRNADPSFS  120
TSKRRRTDDD DDDYYPNAAA AKKVNLQKRV WSEEDEIELL QSFLDYTVTR KLGPHRRTAN  180
SFYNDRVKPE LRGRFNQNQL ADKLRRMRRK YQITFSKLKN SGVDFRFRNP HERGIFX
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
12733KKKKKKK
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A2P5DKT53e-58A0A2P5DKT5_PARAD; DNA-binding storekeeper protein-related transcriptional regulator
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF32553365
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G04930.22e-17DNA-binding storekeeper protein-related transcriptional regulator