PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PK16223.1
Organism
Cannabis sativa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Cannabis
Family bZIP
Protein Properties Length: 289aa    MW: 32281.5 Da    PI: 5.6106
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PK16223.1genomeCCBRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_135.62e-11171216550
                CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
     bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkele 50 
                kr +r   NR +A+rsR RK+++i eLe+ v +L++e +aL  ++ 
  PK16223.1 171 KRVKRILANRQSAQRSRVRKLQYISELERSVTTLQSEVSALSPRVA 216
                8999*********************************999987765 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003381.9E-14167231IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.772169221IPR004827Basic-leucine zipper domain
PfamPF001708.2E-10171216IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.13E-11171225No hitNo description
Gene3DG3DSA:1.20.5.1705.4E-14171222No hitNo description
CDDcd147034.06E-22172222No hitNo description
PROSITE patternPS000360174189IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 289 aa     Download sequence    Send to blast
MAQLPPKIPQ NWANNSFHPH NQQPYWVDEF LDFTAARRGA HRRSASSDSI AFLESTTTEE  60
FNANSTRNSA ALIMMQSSFD KLDDEQLMSM FSDEFSGAGA GAGDGVVSSN PSTSNSDDRD  120
SNNNDEKLSQ KLKSEPEEVE EEGCSEGDEH APPLNSSSNA VSSGDTVFDP KRVKRILANR  180
QSAQRSRVRK LQYISELERS VTTLQSEVSA LSPRVAFLDH QRLILNVDNT ALKQRIAALA  240
QDNIFKDAHQ EALKNEIERL RQVYHHQNIK KMEIHNQQNA LSSARPLAT
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator. {ECO:0000269|PubMed:17719007}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_018850039.11e-112PREDICTED: basic leucine zipper 61-like
SwissprotQ9M2K43e-88BZP61_ARATH; Basic leucine zipper 61
TrEMBLA0A2I4H1M71e-111A0A2I4H1M7_JUGRE; basic leucine zipper 61-like
STRINGXP_010279202.11e-107(Nelumbo nucifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF20113488
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G58120.15e-64bZIP family protein
Publications ? help Back to Top
  1. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]
  2. Gibalová A, et al.
    Characterization of pollen-expressed bZIP protein interactions and the role of ATbZIP18 in the male gametophyte.
    Plant Reprod, 2017. 30(1): p. 1-17
    [PMID:27896439]
  3. Ezer D, et al.
    The G-Box Transcriptional Regulatory Code in Arabidopsis.
    Plant Physiol., 2017. 175(2): p. 628-640
    [PMID:28864470]