PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PK11472.2
Organism
Cannabis sativa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Cannabis
Family bZIP
Protein Properties Length: 450aa    MW: 48418.5 Da    PI: 6.7275
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PK11472.2genomeCCBRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_149.59.1e-16220276359
                XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
     bZIP_1   3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevakl 59 
                + kr+rr+ +NRe+ArrsR+RK+a++ eLe+ v +L  e ++L k+l+  + ++++ 
  PK11472.2 220 DTKRARRMLSNRESARRSRRRKQAQMSELETQVGQLRVEHSTLLKRLSDVNHKYDNA 276
                579********************************************9999888765 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003381.6E-18218282IPR004827Basic-leucine zipper domain
PROSITE profilePS5021711.001220274IPR004827Basic-leucine zipper domain
PfamPF001701.6E-13221274IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1701.1E-10222273No hitNo description
SuperFamilySSF579598.84E-11222272No hitNo description
PROSITE patternPS000360225240IPR004827Basic-leucine zipper domain
PfamPF124982.0E-20289419IPR020983Basic leucine-zipper, C-terminal
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0002240Biological Processresponse to molecule of oomycetes origin
GO:0009626Biological Processplant-type hypersensitive response
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:2000693Biological Processpositive regulation of seed maturation
GO:0005634Cellular Componentnucleus
GO:0005737Cellular Componentcytoplasm
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0046982Molecular Functionprotein heterodimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 450 aa     Download sequence    Send to blast
MNSVFSIDDI SDSYWSTSPA MNRSASEWAL ERFLEEFSTP TTATLNHRPH PMTAPTSSPS  60
LLSQSSSSKF PEADDEVVEI KKPENHRHHL PSSDASSTVT MLPGDSDSYR EFLKNQLDLA  120
CAAVALTRPG DSINLSQSHL PASGTSQLGS GAHDEGRGHG LSTARVDIDD GPNVIPALPP  180
IQKKLGPQSR QTTSGSSKED SDDDDLDGDM DNLDNLDPSD TKRARRMLSN RESARRSRRR  240
KQAQMSELET QVGQLRVEHS TLLKRLSDVN HKYDNAAVDN RILKADIETL RAKVKMAEET  300
VKRVTGLNPL LLAASNGSCT GLPSMNGPMD ASTNAAVAMQ RNQNQMFHQA VPGINAPIPH  360
HQRLDGRGGG GGYHGNTSMS LVGNPRNDVA PQNDVGGNKL GEMPSIQHSG RVGNLPKHLS  420
QGTNSSAAAA AEALPSWGGD VAKNNKQNRI
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1234241RRSRRRKQ
2236241SRRRKQ
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010087124.10.0light-inducible protein CPRF2
TrEMBLA0A2P5FB470.0A0A2P5FB47_TREOI; Basic-leucine zipper transcription factor
STRINGXP_010087124.10.0(Morus notabilis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF136911825
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G54620.12e-58basic leucine zipper 25