PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PK08266.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Cannabis
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Family | WRKY | ||||||||
Protein Properties | Length: 221aa MW: 25354.1 Da PI: 4.5992 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 48.4 | 1.9e-15 | 5 | 47 | 20 | 59 |
S-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 20 fprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 f rsYYrCt++ +C+++k+v+r++edp ++eitY+g+H ++ PK08266.1 5 FCRSYYRCTFRntqSCWATKQVQRTDEDPFLFEITYRGTHSCS 47 68*******998889*************************997 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00774 | 4.9E-12 | 4 | 48 | IPR003657 | WRKY domain |
Gene3D | G3DSA:2.20.25.80 | 2.4E-13 | 5 | 48 | IPR003657 | WRKY domain |
Pfam | PF03106 | 5.7E-13 | 5 | 46 | IPR003657 | WRKY domain |
SuperFamily | SSF118290 | 8.5E-13 | 5 | 48 | IPR003657 | WRKY domain |
PROSITE profile | PS50811 | 11.554 | 7 | 45 | IPR003657 | WRKY domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 221 aa Download sequence Send to blast |
MLPLFCRSYY RCTFRNTQSC WATKQVQRTD EDPFLFEITY RGTHSCSQAS NSVQPPKSPE 60 KKDQKPNNQN MIPQQQQFEQ FNPKFQSNLR VITDELGHRE VMESPFSFPS SSFGCMNVKN 120 EDSFTPLMLD NETFLGGFSQ SFISPATPES NYYQISPFQI NSPTAFHNVQ QQRSESDHTE 180 IISANNSVTN SPIPEMNFSL DPMNNDPNFP LTLLDFTLDS I |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010104968.1 | 7e-88 | probable WRKY transcription factor 53 | ||||
TrEMBL | A0A2P5EAA8 | 1e-113 | A0A2P5EAA8_TREOI; WRKY domain containing protein | ||||
STRING | XP_010104968.1 | 3e-87 | (Morus notabilis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF493 | 34 | 157 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G23810.1 | 2e-22 | WRKY family protein |