PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cre14.g612100.t1.1

Organism

Chlamydomonas reinhardtii

Taxonomic ID

3055

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Chlamydomonadales; Chlamydomonadaceae; Chlamydomonas

Family

Nin-like

Protein Properties

Length: 1717aa MW: 172640 Da PI: 5.8543

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cre14.g612100.t1.1	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	50.2	5.1e-16	1537	1583	3	49
RWP-RK 3 keisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRki 49 +++l dl+ y++ pik+A+k Lg +l+ K+ CR++G++RWP Rk+ Cre14.g612100.t1.1 1537 RQVTLADLKLYYESPIKSASKALGFSLSCFKKLCRRLGVPRWPARKL 1583 689*******************************************8 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS51519	15.46	1528	1606	IPR003035	RWP-RK domain
Pfam	PF02042	3.6E-15	1538	1583	IPR003035	RWP-RK domain

Sequence ? help Back to Top
Protein Sequence Length: 1717 aa Download sequence Send to blast
MPRLPEEVEV EEGAVVPEEQ LMALGSADFM LNSFPDVRMG DDGGTSVDGC SSGTTAWLAA 60 MQQQQQQQQQ QRQPAPATAP PAEDAPVESA HAASADAAAT AMASGDCQRA AASLVPPSQQ 120 PQQPQPMTLA VNSRARRPGI LSLVAGSVVG NRVSSDASAH VVSTTPTAAF TTPQGAQPQA 180 AGQALQQAAV PASDSAVSTV AVASSADGNG ALPPGVMVNI SVRSTEWLRV PDRWGLPTPA 240 EVVAAAAGAA AAGASQAGDF SAHPKIPMSW LFCGRGAHSI SDPVALPAVQ QAAVAAAAGA 300 AAAAHAAAAA VRAAAAAAAD TEAAARAEGG GACSPDADGV LAARRASSTA AFQQLQPALR 360 LPHSSIPQLP AVAEGLLLPP PPLADAPAAA PAGNGRGHGH SEHDAMLSTG PLPDDELLSA 420 WDDDWGPMVP PAGAAARLPP VDRGLLRGLS PWSAAEAELE AVAVGHLLAP LPPLACLQTH 480 MQQPQGGNGG AAAGTRRAEA AAAGARTSIN APPADGARVR SSTRSASRNA AAGAQLAAAS 540 AGAKTAAGGA AGGPHARAYS PFAAVTDSTG AADAVAASAP PVASGAASDG AALDQRTGSS 600 ALAASPATAT AAAILRTQSL NLEPLEPLPQ LPLLEEVHTA FCAGGSGGGA DGVDDMFFEA 660 AAAAAAAAAA AAITISASPF SAAAAGAGLR MDAAADSAAF ALLTASGRGV GSGFGAPGSR 720 QYASADDMVN LLACFARSDS GVDMATQLQV QQQEAPVARM QHVPLSFSNV IPDGGSAHMV 780 PSFAAGEGES MAAAMAGPRP VSPQAAGVAA VAAAAAAMLS PAPPLLTVGQ QQPGPTELIP 840 VRSAVRARGS HAGHPAGAAA VDLRQGLPDL GAGAGAGAEP PAAADVAPAT RLLSGRQHPV 900 CCWPQPLAAA VVGTGAGTAA ERPPSAGMSF GGYGIDGNDD DDSPVEGHLE ALAAAAPTGN 960 NSQRTSVTMI DAFDVLTSME RIKTLQIEPP HAAPAQHHDN EAPPHATVAA TAACCPKPAE 1020 LLHTDGQHHT GAHLQQLQLP QHARLTRLSA PDFFADAPHA AAATHFGAVS IAGAVASVTA 1080 ADACPSSNSA PLPCFALGSG MVDFLAPPTG LTGDGAAAAA GIAWALQQAA RSSYDGGSHV 1140 PYPHPYAQQQ ARMHVSGAGT ITGSAPSTCA AYGLADSLVP TATRAASATP GDITFNGGVV 1200 DDVRQLCQPL QLFAGLDPAG LIPELQYQQH LHQHQHQADG TTASAPAVIS VARKRQQHQH 1260 QQHQQQQRQQ HQHQQQHQHQ HQQQAPGLVR LLSGTMMHAG VPRQQQQQQQ GSAASAGGAA 1320 AAAAAAPPPP LAAVRVKVEV AAEEGGAPGP VRQQPLRAAQ AQAQALALVV KLEQQQAAEE 1380 HIDVLLLGVP QQERRRRLPH DDDADRDYVC SEGEGEQAAA ERGDVDDVDD EGEAGGAGRK 1440 KKQGGGGGRG SAAGLGAARA KGKAAKGRAS SATGSPAHKG KRNGGGPGKA AQARAKAQVA 1500 VEWPVGLQAE PAAAAQDYEA AGGSGGGGGG ELEARSRQVT LADLKLYYES PIKSASKALG 1560 FSLSCFKKLC RRLGVPRWPA RKLLCLKKMR DALRAAGSDC GGRGSSIDSE ISAEERERLL 1620 ERVKLNIAEI YDNPDTPMYG EFTRVRHLQY KSRTTVRRKA ESSAQAAGGG VAKRQGWREC 1680 YSLGADDSTS EGEAEVEDDV EDEEQVEESD GPMSAV*

Sequence ? help Back to Top

Protein Sequence Length: 1717 aa Download sequence Send to blast

MPRLPEEVEV EEGAVVPEEQ LMALGSADFM LNSFPDVRMG DDGGTSVDGC SSGTTAWLAA  60
MQQQQQQQQQ QRQPAPATAP PAEDAPVESA HAASADAAAT AMASGDCQRA AASLVPPSQQ  120
PQQPQPMTLA VNSRARRPGI LSLVAGSVVG NRVSSDASAH VVSTTPTAAF TTPQGAQPQA  180
AGQALQQAAV PASDSAVSTV AVASSADGNG ALPPGVMVNI SVRSTEWLRV PDRWGLPTPA  240
EVVAAAAGAA AAGASQAGDF SAHPKIPMSW LFCGRGAHSI SDPVALPAVQ QAAVAAAAGA  300
AAAAHAAAAA VRAAAAAAAD TEAAARAEGG GACSPDADGV LAARRASSTA AFQQLQPALR  360
LPHSSIPQLP AVAEGLLLPP PPLADAPAAA PAGNGRGHGH SEHDAMLSTG PLPDDELLSA  420
WDDDWGPMVP PAGAAARLPP VDRGLLRGLS PWSAAEAELE AVAVGHLLAP LPPLACLQTH  480
MQQPQGGNGG AAAGTRRAEA AAAGARTSIN APPADGARVR SSTRSASRNA AAGAQLAAAS  540
AGAKTAAGGA AGGPHARAYS PFAAVTDSTG AADAVAASAP PVASGAASDG AALDQRTGSS  600
ALAASPATAT AAAILRTQSL NLEPLEPLPQ LPLLEEVHTA FCAGGSGGGA DGVDDMFFEA  660
AAAAAAAAAA AAITISASPF SAAAAGAGLR MDAAADSAAF ALLTASGRGV GSGFGAPGSR  720
QYASADDMVN LLACFARSDS GVDMATQLQV QQQEAPVARM QHVPLSFSNV IPDGGSAHMV  780
PSFAAGEGES MAAAMAGPRP VSPQAAGVAA VAAAAAAMLS PAPPLLTVGQ QQPGPTELIP  840
VRSAVRARGS HAGHPAGAAA VDLRQGLPDL GAGAGAGAEP PAAADVAPAT RLLSGRQHPV  900
CCWPQPLAAA VVGTGAGTAA ERPPSAGMSF GGYGIDGNDD DDSPVEGHLE ALAAAAPTGN  960
NSQRTSVTMI DAFDVLTSME RIKTLQIEPP HAAPAQHHDN EAPPHATVAA TAACCPKPAE  1020
LLHTDGQHHT GAHLQQLQLP QHARLTRLSA PDFFADAPHA AAATHFGAVS IAGAVASVTA  1080
ADACPSSNSA PLPCFALGSG MVDFLAPPTG LTGDGAAAAA GIAWALQQAA RSSYDGGSHV  1140
PYPHPYAQQQ ARMHVSGAGT ITGSAPSTCA AYGLADSLVP TATRAASATP GDITFNGGVV  1200
DDVRQLCQPL QLFAGLDPAG LIPELQYQQH LHQHQHQADG TTASAPAVIS VARKRQQHQH  1260
QQHQQQQRQQ HQHQQQHQHQ HQQQAPGLVR LLSGTMMHAG VPRQQQQQQQ GSAASAGGAA  1320
AAAAAAPPPP LAAVRVKVEV AAEEGGAPGP VRQQPLRAAQ AQAQALALVV KLEQQQAAEE  1380
HIDVLLLGVP QQERRRRLPH DDDADRDYVC SEGEGEQAAA ERGDVDDVDD EGEAGGAGRK  1440
KKQGGGGGRG SAAGLGAARA KGKAAKGRAS SATGSPAHKG KRNGGGPGKA AQARAKAQVA  1500
VEWPVGLQAE PAAAAQDYEA AGGSGGGGGG ELEARSRQVT LADLKLYYES PIKSASKALG  1560
FSLSCFKKLC RRLGVPRWPA RKLLCLKKMR DALRAAGSDC GGRGSSIDSE ISAEERERLL  1620
ERVKLNIAEI YDNPDTPMYG EFTRVRHLQY KSRTTVRRKA ESSAQAAGGG VAKRQGWREC  1680
YSLGADDSTS EGEAEVEDDV EDEEQVEESD GPMSAV*

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Cre14.g612100.t1.1

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
TrEMBL	A0A2K3CXA8	0.0	A0A2K3CXA8_CHLRE; Uncharacterized protein

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Chlorophytae	OGCP6094	2	8

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G66990.1	9e-09	RWP-RK domain-containing protein

Link Out ? help Back to Top
Phytozome	Cre14.g612100.t1.1