PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cre06.g310500.t1.2
Organism
Chlamydomonas reinhardtii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Chlamydomonadales; Chlamydomonadaceae; Chlamydomonas
Family bZIP
Protein Properties Length: 529aa    MW: 52419.1 Da    PI: 8.4056
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cre06.g310500.t1.2genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_125.72.6e-08139199161
                         XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
              bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklks 61 
                         +k+ +r +r+ +NR++A+  R+RKk+++  Le+ + e ++    L k++e  + + ++l++
  Cre06.g310500.t1.2 139 DKDARRLKRLLRNRVSAQQARERKKQYVTSLEDQIREQQSHIGLLEKRIELVESQNEALRN 199
                         58899**********************************************9999999876 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003383.1E-8139203IPR004827Basic-leucine zipper domain
PfamPF077165.0E-5140191IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.45141204IPR004827Basic-leucine zipper domain
SuperFamilySSF579593.73E-10143201No hitNo description
Gene3DG3DSA:1.20.5.1704.0E-11143200No hitNo description
PROSITE patternPS000360146161IPR004827Basic-leucine zipper domain
CDDcd147042.02E-12153194No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 529 aa     Download sequence    Send to blast
MDSSTAAATA GAGAGGGANS SGAASGAGLT PSQRGELELA KARAERAAAG RHKAASGGGG  60
GGGGGGGGSS KRQRGGGGGG SRRSRPRDDD SSDDDDEDGG GGPGSGGAGD ASDGELERLS  120
KLSPEELAAR LAAGGCGTDK DARRLKRLLR NRVSAQQARE RKKQYVTSLE DQIREQQSHI  180
GLLEKRIELV ESQNEALRNI IRTMRGFADA PAPAPPAAAA GPADAAAQPK PQEGAAKPHR  240
PGAGTGTDAA AAGGARPAQP QTAAAPAAPA APASAVAGGA AAAPAMGTGK EQAPQRQPPQ  300
SRHSRAQVVP AAPHGGGGAG PGSGPAAGAV ADTAGASAAM VPQQAPHPHP VAQQAQHLQP  360
HPFGQAGACA PGSAPGGVLA PHAPPPQPHQ PHHPMLPTHN SSGVPQMQMP QLQPYGSSML  420
QPQHSHTHTH SHHQQQHMVL QPGPASAIMR PGLQPPLPQP QPQPQPQLRG GAMSVMAPHA  480
TAPATAMAGP QALMHQAGGP VAMMEDLSDV GVVPPAVEAL DYCVPDFC*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
15568SGGGGGGGGGGGGS
Cis-element ? help Back to Top
SourceLink
PlantRegMapCre06.g310500.t1.2
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A2K3DRN70.0A0A2K3DRN7_CHLRE; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
ChlorophytaeOGCP46161010
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G11260.16e-08bZIP family protein