PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.supercontig_57.70
Organism
Carica papaya
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Caricaceae; Carica
Family NAC
Protein Properties Length: 506aa    MW: 57125.4 Da    PI: 6.1043
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.supercontig_57.70genomeASGPBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM144.36.6e-4571373128
                          NAM   3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk.....kvkaeekewyfFskrdkkyatgkrknratk 79 
                                  +G+rF+P+d elv +yL +k++g++ ++   + evd++k ePwdLpk      ++++++ wyfF+ r +ky+++kr+nr+t+
  evm.model.supercontig_57.70   7 VGYRFSPSDAELVGHYLMNKIKGNESKV-FPVVEVDLCKNEPWDLPKiterlGIRSKSQVWYFFCARVSKYNNSKRANRTTA 87 
                                  7************************999.5699*************6577666666888*********************** PP

                          NAM  80 sgyWkatgkdkevlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128
                                  +gyWkatgkd++v +  +++++g kktLvfy+gr p+g++t Wv+heyrl
  evm.model.supercontig_57.70  88 AGYWKATGKDRNVNDPdTNREIGAKKTLVFYRGRVPNGVRTPWVIHEYRL 137
                                  **************9977788***************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100548.3145153IPR003441NAC domain
SuperFamilySSF1019411.26E-467153IPR003441NAC domain
PfamPF023651.2E-237137IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0005886Cellular Componentplasma membrane
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 506 aa     Download sequence    Send to blast
MGEQEIVGYR FSPSDAELVG HYLMNKIKGN ESKVFPVVEV DLCKNEPWDL PKITERLGIR  60
SKSQVWYFFC ARVSKYNNSK RANRTTAAGY WKATGKDRNV NDPDTNREIG AKKTLVFYRG  120
RVPNGVRTPW VIHEYRLSDP KQDAYVICKM KKKGSEKTVD SYGDRGEPSR PPVSDNENYA  180
PRNTILEEIL QSQVNADDYL ASLNDHDVLD HDWHVKLPDE GISLNDLDCS IDLSIDQNGP  240
QQQFYFPDEE EELDPEFVNA LFADEDESPH GETVHTFRHG YSQPMSVTGV YFENSSDTDT  300
EILHGRSGRI LEATGSSVGS SSSNQHKQMH VEDVFHGDEI LKRDSLSELL HTDTPASVEP  360
FVTTNTCKAQ YRSVRGFLTQ ESPKRFQLRE HEPALKNQAK EVSKQVTSVD LRKKKISMKN  420
SEKQQKIVKV SDGQNQTIAK GMSSGPVSND RKGPFIFFEK SQSRHEPSPP SLYFGNACGL  480
SQQDTNEGAR REPNIESHVY ILPAT*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A7e-33815618171Stress-induced transcription factor NAC1
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00426DAPTransfer from AT4G01550Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapevm.model.supercontig_57.70
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021897189.10.0NAC domain-containing protein 69-like
TrEMBLA0A286KIT00.0A0A286KIT0_CARPA; NAC7 protein
STRINGevm.model.supercontig_57.700.0(Carica papaya)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM85042839
Representative plantOGRP1715800
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G17260.13e-44NAC domain containing protein 86