PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.supercontig_195.35
Organism
Carica papaya
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Caricaceae; Carica
Family NAC
Protein Properties Length: 436aa    MW: 48296.7 Da    PI: 8.1889
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.supercontig_195.35genomeASGPBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM155.22.9e-48261521128
                           NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.kkvkaeekewyfFskrdkkyatgkrknratks 80 
                                   + pGfrF+Ptd el+++yLkkk+eg ++ +  vi+e++i+k+ePwdLp k++ ++e+ew+fF++r +ky++g++++rat+ 
  evm.model.supercontig_195.35  26 MFPGFRFSPTDTELISYYLKKKIEGLENCV-GVISEIEICKYEPWDLPaKSIIKSESEWFFFCTRGRKYPNGSQSRRATEM 105
                                   579************************877.99***************667777889************************ PP

                           NAM  81 gyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                                   gyWkatgk+++v+s +++ +g+k+tLvf+ grapkge+t+W++hey +
  evm.model.supercontig_195.35 106 GYWKATGKERNVKS-GSSIIGTKRTLVFHVGRAPKGERTEWILHEYCM 152
                                   **************.999****************************86 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019419.29E-5216193IPR003441NAC domain
PROSITE profilePS5100549.86226196IPR003441NAC domain
PfamPF023654.1E-2428151IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009626Biological Processplant-type hypersensitive response
GO:0009910Biological Processnegative regulation of flower development
GO:0034976Biological Processresponse to endoplasmic reticulum stress
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0005783Cellular Componentendoplasmic reticulum
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 436 aa     Download sequence    Send to blast
MTTGGETTGG TGMSRETQMS IAASSMFPGF RFSPTDTELI SYYLKKKIEG LENCVGVISE  60
IEICKYEPWD LPAKSIIKSE SEWFFFCTRG RKYPNGSQSR RATEMGYWKA TGKERNVKSG  120
SSIIGTKRTL VFHVGRAPKG ERTEWILHEY CMKGNSQEYD MGLTRKLWPE LITSINLPFF  180
IANLKDSPVV CRLRRNSEFR QNSSSNQASA SLTQLSPLHP SSYAISEGNT DQTGNSEGDK  240
ILEWFSKKCS SSYDSHSTEQ IDSASESERK HLNEVTASCS HPKESDDEDW YAEILKDDII  300
KLDESSLLTP APPPVVASKY EPEKKYEVAV GAVASTAVAY SNENTMLKFR KPAEVVSHAE  360
APDDEKSKSK SKSKSTSKPS ILDKPPFCLI SILSGGRVKR LQLYVVFVVV SLLALILILS  420
SRKLGAGAGD HVRFL*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A5e-40121522140Stress-induced transcription factor NAC1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapevm.model.supercontig_195.35
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021887471.10.0NAC domain-containing protein 89-like isoform X2
TrEMBLA0A1D6YZC70.0A0A1D6YZC7_CARPA; NAC39
STRINGevm.model.supercontig_195.350.0(Carica papaya)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM104532533
Representative plantOGRP10249610
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G22290.14e-90NAC domain containing protein 89