PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | e_gw1.27.75.1 | ||||||||
Common Name | CHLNCDRAFT_27756 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Trebouxiophyceae; Chlorellales; Chlorellaceae; Chlorella
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Family | Nin-like | ||||||||
Protein Properties | Length: 61aa MW: 6984.21 Da PI: 9.2521 | ||||||||
Description | Nin-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | RWP-RK | 55.5 | 1.1e-17 | 20 | 59 | 3 | 42 |
RWP-RK 3 keisledlskyFslpikdAAkeLgvclTvLKriCRqyGIk 42 +ei+ e++++y++lp ++A+k+Lg++lT+LKriCR++GI+ e_gw1.27.75.1 20 HEITKEEIEQYYHLPCEEASKQLGIGLTILKRICRRLGIE 59 68*************************************7 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51519 | 12.184 | 5 | 60 | IPR003035 | RWP-RK domain |
Pfam | PF02042 | 3.9E-16 | 22 | 59 | IPR003035 | RWP-RK domain |
Sequence ? help Back to Top |
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Protein Sequence Length: 61 aa Download sequence Send to blast |
MSRVPTTLLI RPFPAGRYSH EITKEEIEQY YHLPCEEASK QLGIGLTILK RICRRLGIEK 60 * |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_005843797.1 | 9e-37 | expressed protein | ||||
TrEMBL | E1ZR94 | 2e-35 | E1ZR94_CHLVA; Expressed protein | ||||
STRING | XP_005843797.1 | 3e-36 | (Chlorella variabilis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Chlorophytae | OGCP84 | 16 | 50 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G18790.1 | 2e-09 | RWP-RK domain-containing protein |
Link Out ? help Back to Top | |
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Entrez Gene | 17351128 |
Publications ? help Back to Top | |||
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