PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID maker-scaffold02051-augustus-gene-0.10-mRNA-1
Organism
Castanea mollissima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Castanea
Family NAC
Protein Properties Length: 291aa    MW: 33677.9 Da    PI: 9.0143
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
maker-scaffold02051-augustus-gene-0.10-mRNA-1genomeTHGPView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM154.25.9e-48171433128
                                            NAM   3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdk 66 
                                                    pGfrFhPt+eel+++yLk+ v gk+++  ++i  ++iy+++PwdLp+ +k +e+ewyfF++rd+
  maker-scaffold02051-augustus-gene-0.10-mRNA-1  17 PGFRFHPTEEELLDFYLKNMVYGKRMHY-DIIGFLNIYHHDPWDLPRLAKIGEREWYFFVPRDR 79 
                                                    9**************************9.99***************8888899*********** PP

                                            NAM  67 kyatgkrknratksgyWkatgkdkevlsk..kgelvglkktLvfykgrapkgektdWvmheyrl 128
                                                    k+ +g r+nr+t++g+Wkatg+d++++s    ++ +gl+ktLvfykgrap+g+ktdWvm+eyrl
  maker-scaffold02051-augustus-gene-0.10-mRNA-1  80 KHGSGGRPNRTTENGFWKATGSDRKIVSLsdPKRIIGLRKTLVFYKGRAPRGSKTDWVMNEYRL 143
                                                    **************************997666778***************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100554.29115161IPR003441NAC domain
SuperFamilySSF1019411.7E-5616161IPR003441NAC domain
PfamPF023652.2E-2517143IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009965Biological Processleaf morphogenesis
GO:0010200Biological Processresponse to chitin
GO:0045792Biological Processnegative regulation of cell size
GO:0048281Biological Processinflorescence morphogenesis
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 291 aa     Download sequence    Send to blast
MAAVSGMDEM RPELELPGFR FHPTEEELLD FYLKNMVYGK RMHYDIIGFL NIYHHDPWDL  60
PRLAKIGERE WYFFVPRDRK HGSGGRPNRT TENGFWKATG SDRKIVSLSD PKRIIGLRKT  120
LVFYKGRAPR GSKTDWVMNE YRLPDSCPLP KDIVLCKIYR KATSLKVLEQ RAAMEEEMKF  180
HASPSPPQSS PLETISFCTP QGDQLMAITP VQNVIFKKEV EDVLAKVEKK DDRPLENKVS  240
PTSLQFPLGK DKLPELQVPK LSMDWSQDPF WTQLNSPWLQ NLTPLANILN F
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A2e-461316112168Stress-induced transcription factor NAC1
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscription activator that binds sequence-specific DNA motifs. Involved in stress response. Plays a positive role in drought and salt stress tolerance through the modulation of abscisic acid-mediated signaling. {ECO:0000269|PubMed:26834774}.
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Induced by drought stress, salt stress and abscisic acid (ABA). {ECO:0000269|PubMed:26834774}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_023892647.10.0NAC domain-containing protein 22
SwissprotQ10S651e-103NAC22_ORYSJ; NAC domain-containing protein 22
TrEMBLA0A2N9I2V50.0A0A2N9I2V5_FAGSY; Uncharacterized protein
STRINGEOX975001e-152(Theobroma cacao)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF62143251
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G17040.11e-123NAC domain containing protein 36
Publications ? help Back to Top
  1. Hong Y,Zhang H,Huang L,Li D,Song F
    Overexpression of a Stress-Responsive NAC Transcription Factor Gene ONAC022 Improves Drought and Salt Tolerance in Rice.
    Front Plant Sci, 2016. 7: p. 4
    [PMID:26834774]