PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | maker-scaffold00060-snap-gene-1.69-mRNA-1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Castanea
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Family | bZIP | ||||||||
Protein Properties | Length: 233aa MW: 26338.5 Da PI: 8.5236 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 30.6 | 7.3e-10 | 115 | 150 | 13 | 48 |
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 13 NReAArrsRqRKkaeieeLeekvkeLeaeNkaLkke 48 NR +A+rsR RK+++i eLe+ v +L+ae + L + maker-scaffold00060-snap-gene-1.69-mRNA-1 115 NRQSAQRSRVRKLQYISELERSVTSLQAEVSVLSPR 150 ****************************98877655 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 9.1E-8 | 103 | 167 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 2.25E-9 | 112 | 159 | No hit | No description |
CDD | cd14703 | 1.56E-20 | 112 | 158 | No hit | No description |
Gene3D | G3DSA:1.20.5.170 | 2.0E-11 | 114 | 158 | No hit | No description |
Pfam | PF00170 | 2.1E-7 | 114 | 151 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 233 aa Download sequence Send to blast |
MAQLPPKIPN LSPNWHDFSH QRIPSIGSMT PNITTTNSTP TNATTQNPSW VDEFLDFSSS 60 RRGSHRRSVS DSITFLEVPM LDECRGSNAP PGSGAASNEF DRFDDEQFLS IILANRQSAQ 120 RSRVRKLQYI SELERSVTSL QAEVSVLSPR VAFLDHQRLL LNVDNSALKQ RIAALAQDKI 180 FKDAHQEALK REIERLRQVY HQQNLKKMEN GAQQSQPHSD AKASIDKEQL LHV |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcriptional activator. {ECO:0000269|PubMed:17719007}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_023928738.1 | 8e-79 | basic leucine zipper 61-like | ||||
Swissprot | Q9M2K4 | 6e-66 | BZP61_ARATH; Basic leucine zipper 61 | ||||
TrEMBL | A0A314Y8E7 | 1e-104 | A0A314Y8E7_PRUYE; Basic leucine zipper 61 | ||||
STRING | Lus10039902 | 2e-87 | (Linum usitatissimum) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF21578 | 4 | 4 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G58120.1 | 6e-68 | bZIP family protein |
Publications ? help Back to Top | |||
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