PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | augustus_masked-scaffold15241-abinit-gene-0.0-mRNA-1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Castanea
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Family | EIL | ||||||||
Protein Properties | Length: 117aa MW: 13221.7 Da PI: 10.3156 | ||||||||
Description | EIL family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | EIN3 | 138.6 | 9.4e-43 | 1 | 113 | 7 | 124 |
XXXXXXXXXXXXXXXXX..XXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS EIN3 7 mwkdqmllkrlkerkkqlledkeaatgakksnksneqarrkkmsraQDgiLkYMlke 63 mwkd ++l+rl er+k ++++a a+k++ + + r sraQ giLkYMlk augustus_masked-scaffold15241-abinit-gene-0.0-mRNA-1 1 MWKDHIKLNRLMERQKI--AAQQA---AEKQKPKQTTMIRLGGSRAQVGILKYMLKL 52 9********99999986..34554...667778888999****************** PP XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS EIN3 64 mevcnaqGfvYgiipekgkpvegasdsLraWWkekvefdrngpaaiskyqaknlils 120 mevc++ GfvYgiipekgkp +gas+++raWWkekv+fd+ngpa i+ky+ak+l++s augustus_masked-scaffold15241-abinit-gene-0.0-mRNA-1 53 MEVCKVCGFVYGIIPEKGKPLSGASNNIRAWWKEKVKFDKNGPATITKYEAKCLAMS 109 ********************************************************9 PP XXXX CS EIN3 121 gess 124 ++s augustus_masked-scaffold15241-abinit-gene-0.0-mRNA-1 110 EDSA 113 8875 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF04873 | 4.3E-43 | 1 | 113 | No hit | No description |
Sequence ? help Back to Top |
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Protein Sequence Length: 117 aa Download sequence Send to blast |
MWKDHIKLNR LMERQKIAAQ QAAEKQKPKQ TTMIRLGGSR AQVGILKYML KLMEVCKVCG 60 FVYGIIPEKG KPLSGASNNI RAWWKEKVKF DKNGPATITK YEAKCLAMSE DSAITCC |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Probable transcription factor that may be involved in the ethylene response pathway. {ECO:0000269|PubMed:9215635, ECO:0000269|PubMed:9851977}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | AJ298994 | 1e-101 | AJ298994.1 Fagus sylvatica mRNA for EIN3/EIL-like transcription regulator (einl1 gene), clone FsEINL1. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_017982625.1 | 9e-56 | PREDICTED: ETHYLENE INSENSITIVE 3-like 3 protein | ||||
Refseq | XP_017982626.1 | 9e-56 | PREDICTED: ETHYLENE INSENSITIVE 3-like 3 protein | ||||
Swissprot | O23116 | 2e-46 | EIL3_ARATH; ETHYLENE INSENSITIVE 3-like 3 protein | ||||
TrEMBL | A0A2N9HGR8 | 3e-55 | A0A2N9HGR8_FAGSY; Uncharacterized protein | ||||
TrEMBL | Q9FDV5 | 3e-55 | Q9FDV5_FAGSY; Ethylene insensitive (EIN3/EIL)-like transcription regulator | ||||
STRING | EOY32534 | 3e-55 | (Theobroma cacao) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF322 | 34 | 200 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G73730.1 | 1e-42 | ETHYLENE-INSENSITIVE3-like 3 |
Publications ? help Back to Top | |||
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