PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

augustus_masked-scaffold05042-abinit-gene-0.1-mRNA-1

Organism

Castanea mollissima

Taxonomic ID

60419

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Castanea

Family

bZIP

Protein Properties

Length: 147aa MW: 17161.3 Da PI: 8.5053

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
augustus_masked-scaffold05042-abinit-gene-0.1-mRNA-1	genome	THGP	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	40.8	4.8e-13	62	107	5	50
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkele 50 +r rr+++NRe+ArrsR RKk+ +e+L + Le eN++Lkk+l augustus_masked-scaffold05042-abinit-gene-0.1-mRNA-1 62 RRLRRMISNRESARRSRWRKKQHVENLSSQMNRLELENQELKKRLG 107 799***************************************9986 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00338	2.1E-12	58	122	IPR004827	Basic-leucine zipper domain
Gene3D	G3DSA:1.20.5.170	8.8E-11	58	107	No hit	No description
PROSITE profile	PS50217	10.852	60	112	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	4.29E-12	62	115	No hit	No description
Pfam	PF00170	2.0E-11	62	108	IPR004827	Basic-leucine zipper domain
CDD	cd14702	7.09E-16	63	112	No hit	No description
PROSITE pattern	PS00036	0	65	80	IPR004827	Basic-leucine zipper domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 147 aa Download sequence Send to blast
MSMFFSEEPV QFQCPVPEET GFTPDELQEI LSLLESGGDS VSLSPNSGSE GSSRAVYNDN 60 ERRLRRMISN RESARRSRWR KKQHVENLSS QMNRLELENQ ELKKRLGSAL RQWHVVWGEN 120 ERLRFESVAL QARLSNLYRI LFTMQAQ

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_023900300.1	3e-98	basic leucine zipper 4-like
TrEMBL	A0A2N9EMY3	7e-76	A0A2N9EMY3_FAGSY; Uncharacterized protein
STRING	EOY15673	7e-51	(Theobroma cacao)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF5996	30	52

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G49760.1	2e-19	basic leucine-zipper 5