PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MELO3C025971P1
Organism
Cucumis melo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Cucumis
Family SAP
Protein Properties Length: 447aa    MW: 49334.8 Da    PI: 6.9465
Description SAP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MELO3C025971P1genomeMELONOMICSView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SAP697.71.3e-212444612454
             SAP  12 seegseggeggdassgesegpsssrqraanevwpePflealatqvaidasrslGrlaaasalanvfqvcstwravsrsdllwqrltrriWrrtkl 106
                     s  +s+gg    +++g+++gpsssr+r ane+wpePf+ealatqvaidasrslGr+ aa al nvfqvcstwravsrs+llw+rlt riW rt++
  MELO3C025971P1   4 SAPSSSGGGRRRRGGGDFDGPSSSRRRGANEIWPEPFIEALATQVAIDASRSLGRIHAAAALSNVFQVCSTWRAVSRSELLWHRLTTRIWGRTYR 98 
                     22233333344455689****************************************************************************** PP

             SAP 107 lrdtWreeyiyrhrtarnfrtrrysyvtlqfdpadvdedndadalsCrclalsdkylaaGfadGavrlfdletrlhvstflpqhrdrlGrfsrav 201
                     l dtWr+ey+y+h +arnfrt+r+ +++l++d++dvde   +d l+Crcla+s ++la+GfadG+vrlfdl+trlh++tf+p+hrdrlG+fsrav
  MELO3C025971P1  99 LLDTWRDEYVYWHNIARNFRTGRSLHTVLRYDQSDVDE---PDGLMCRCLAISLRHLACGFADGTVRLFDLATRLHITTFRPHHRDRLGQFSRAV 190
                     **********************************9998...689*************************************************** PP

             SAP 202 sGiv.isdsrlvfatldGdihvavidgag..aaaarrallGdvvndGalvdfaGsgrWwvGlyaGvpGrafhiWdaeteelvfvGGsltdPeavm 293
                     sGiv i+d+rlvfa++dGdihv +i  +    +++rr++ G+v+ndG+lvdfaG++rWwvGlyaGvpGra hiWd+++eelvfvGGsltdPe+v+
  MELO3C025971P1 191 SGIViIADARLVFASIDGDIHVGIIAPNPaaISPTRRVHEGNVMNDGVLVDFAGCDRWWVGLYAGVPGRAIHIWDGNSEELVFVGGSLTDPESVT 285
                     **972579*****************764323789************************************************************* PP

             SAP 294 GWhmlteltelvGrvrvteretavaCtslrlvvfdlrnqgvvlreeeerrGlivssldasneayvvvdsrGvatvrrvenleevcrfrvrg.aqr 387
                     GWhml+elte vGrvrv+++e+avaCtsl+l+v+dlrnq+vvl+eee+    iv+s+d+sne+y+vvd +G+a+vrrv+++eevc f+vrg a+r
  MELO3C025971P1 286 GWHMLAELTEQVGRVRVSNQESAVACTSLQLMVLDLRNQEVVLNEEENGVVRIVTSMDVSNETYIVVDGHGMAIVRRVDTMEEVCTFTVRGaAHR 380
                     ********************************************99999999***************************************99** PP

             SAP 388 gvlgCvnggyalvyaggvlrvWeiekkegylyslrervgevnalvaddrhvavsssdgtihlldfga 454
                     gv+gC+n g+a++ +gg +rvW+ie+ + yl  +rer+g +na+va+dr+va+s+ d+t+hl+dfga
  MELO3C025971P1 381 GVVGCINMGFAVMSSGGTIRVWDIEHGQ-YLCRFRERIGAANAIVANDRYVAASAFDTTLHLWDFGA 446
                     *************************966.************************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.1280.508.2E-664123No hitNo description
SuperFamilySSF813832.83E-665120IPR001810F-box domain
Gene3DG3DSA:2.130.10.105.5E-6124215IPR015943WD40/YVTN repeat-like-containing domain
SuperFamilySSF509987.46E-21137213IPR011047Quinoprotein alcohol dehydrogenase-like superfamily
SuperFamilySSF509987.46E-21256444IPR011047Quinoprotein alcohol dehydrogenase-like superfamily
Gene3DG3DSA:2.130.10.102.2E-12258444IPR015943WD40/YVTN repeat-like-containing domain
PROSITE profilePS502949.863390446IPR017986WD40-repeat-containing domain
PROSITE patternPS006780430444IPR019775WD40 repeat, conserved site
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009554Biological Processmegasporogenesis
GO:0009908Biological Processflower development
GO:0030163Biological Processprotein catabolic process
GO:0046622Biological Processpositive regulation of organ growth
GO:0005634Cellular Componentnucleus
GO:0005515Molecular Functionprotein binding
Sequence ? help Back to Top
Protein Sequence    Length: 447 aa     Download sequence    Send to blast
MSSSAPSSSG GGRRRRGGGD FDGPSSSRRR GANEIWPEPF IEALATQVAI DASRSLGRIH  60
AAAALSNVFQ VCSTWRAVSR SELLWHRLTT RIWGRTYRLL DTWRDEYVYW HNIARNFRTG  120
RSLHTVLRYD QSDVDEPDGL MCRCLAISLR HLACGFADGT VRLFDLATRL HITTFRPHHR  180
DRLGQFSRAV SGIVIIADAR LVFASIDGDI HVGIIAPNPA AISPTRRVHE GNVMNDGVLV  240
DFAGCDRWWV GLYAGVPGRA IHIWDGNSEE LVFVGGSLTD PESVTGWHML AELTEQVGRV  300
RVSNQESAVA CTSLQLMVLD LRNQEVVLNE EENGVVRIVT SMDVSNETYI VVDGHGMAIV  360
RRVDTMEEVC TFTVRGAAHR GVVGCINMGF AVMSSGGTIR VWDIEHGQYL CRFRERIGAA  420
NAIVANDRYV AASAFDTTLH LWDFGA*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
11018GGRRRRGGG
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional regulator involved in the specification of floral identity. Acts as A class cadastral protein by repressing the C class floral homeotic gene AGAMOUS in the external flower organs in association with APETALA2 and other repressors. Is required to maintain floral meristem identity in concert with AGAMOUS. Interacts also with APETALA2 to ensure the normal development of ovule.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankLN6819170.0LN681917.1 Cucumis melo genomic scaffold, anchoredscaffold00085.
GenBankLN7132650.0LN713265.1 Cucumis melo genomic chromosome, chr_11.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008464168.10.0PREDICTED: transcriptional regulator STERILE APETALA isoform X1
SwissprotQ9FKH11e-170SAP_ARATH; Transcriptional regulator STERILE APETALA
TrEMBLA0A1S3CKV50.0A0A1S3CKV5_CUCME; transcriptional regulator STERILE APETALA isoform X1
STRINGXP_008464168.10.0(Cucumis melo)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF76873146
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G35770.11e-160SAP family protein
Publications ? help Back to Top
  1. Li N, et al.
    STERILE APETALA modulates the stability of a repressor protein complex to control organ size in Arabidopsis thaliana.
    PLoS Genet., 2018. 14(2): p. e1007218
    [PMID:29401459]