PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MELO3C021421P1
Organism
Cucumis melo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Cucumis
Family bZIP
Protein Properties Length: 331aa    MW: 37541.5 Da    PI: 6.913
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MELO3C021421P1genomeMELONOMICSView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_1444.7e-14257299547
                     CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
          bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkk 47 
                     +r+rr++kNRe+A rsR+RK+a++ eLe +  +L++eN +Lk+
  MELO3C021421P1 257 RRQRRMIKNRESAARSRARKQAYTVELEVELNQLKEENIKLKQ 299
                     79************************************99996 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003384.3E-11253313IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.381255299IPR004827Basic-leucine zipper domain
PfamPF001707.4E-13257300IPR004827Basic-leucine zipper domain
CDDcd147073.11E-22257298No hitNo description
Gene3DG3DSA:1.20.5.1705.5E-15257301No hitNo description
SuperFamilySSF579592.38E-11257300No hitNo description
PROSITE patternPS000360260275IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0033613Molecular Functionactivating transcription factor binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 331 aa     Download sequence    Send to blast
MENSQLEEMI SEVAARQTNK HDSILSLTLD EIQCKSGKNF GGMSMDEFLA NIWNVEDIQT  60
QFHSQSQENE PQNHHPFMVT NNSRSNLCNQ GSFSIPIPLC GKTVDEIWSE IHKDQQHPRH  120
QKFINVQQNP CQNQQALGEM TLEDFLVKAG VVQEASSSSC SMKQQLCSVN NRSMVDLGFG  180
IGEKLGLSLS YQQNNDAARI RSMSGNCFSN YQMLNQSVGE PSDNSSIQKC QGLMTDWVEP  240
SNKKRIIDGP TEVVVQRRQR RMIKNRESAA RSRARKQAYT VELEVELNQL KEENIKLKQI  300
VVKFFSVLQL SICLYLFHYL ILMNIKNCAG *
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankLN6819240.0LN681924.1 Cucumis melo genomic scaffold, anchoredscaffold00047.
GenBankLN7132650.0LN713265.1 Cucumis melo genomic chromosome, chr_11.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008458572.20.0PREDICTED: ABSCISIC ACID-INSENSITIVE 5-like protein 1
TrEMBLA0A1S3C9E30.0A0A1S3C9E3_CUCME; ABSCISIC ACID-INSENSITIVE 5-like protein 1
STRINGXP_008458572.10.0(Cucumis melo)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF20923374
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G44460.12e-61bZIP family protein