PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | MELO3C018845P1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Cucumis
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Family | bZIP | ||||||||
Protein Properties | Length: 328aa MW: 36467.4 Da PI: 5.9349 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 33.6 | 8.6e-11 | 188 | 231 | 5 | 48 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkke 48 kr +r NR +A+rsR RK+++i eLe+ v +L+ae + L + MELO3C018845P1 188 KRVKRILANRQSAQRSRVRKLQYISELERSVTSLQAEVSVLSPR 231 899*********************************98877655 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 3.8E-14 | 184 | 248 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF07716 | 2.6E-9 | 185 | 233 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 9.622 | 186 | 238 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 4.42E-11 | 188 | 242 | No hit | No description |
Gene3D | G3DSA:1.20.5.170 | 2.1E-11 | 188 | 239 | No hit | No description |
CDD | cd14703 | 2.04E-22 | 189 | 239 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 191 | 206 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 328 aa Download sequence Send to blast |
MAQLPPKIPN MASNWPELSR QKIPSTETFA PTTTTPPVTQ QNHPSWVDEF LDFSSARRGS 60 HRRSVSDSIT FLEMPMLEDD CRASAAPPPP STAAGDRNEF DRFDDEQFLS MFNDEISAAV 120 APTLSSSNPS TPSDHNSIND EKDAQNDGKV NQNKNEPDEV QSPQHSENQT QSNSTATAGS 180 TDRITDPKRV KRILANRQSA QRSRVRKLQY ISELERSVTS LQAEVSVLSP RVAFLDHQRL 240 LLNVDNSALK QRIAALAQDK IFKDAHQEAL KREIERLRQV YHQQNIKKME NASPSPAITP 300 SQPVATTIPD GKLPNVDQNE QVPNVMV* |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcriptional activator. {ECO:0000269|PubMed:17719007}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | LN681792 | 0.0 | LN681792.1 Cucumis melo genomic scaffold, anchoredscaffold00034. | |||
GenBank | LN713255 | 0.0 | LN713255.1 Cucumis melo genomic chromosome, chr_1. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_008455472.1 | 0.0 | PREDICTED: basic leucine zipper 61-like | ||||
Swissprot | Q9M2K4 | 1e-118 | BZP61_ARATH; Basic leucine zipper 61 | ||||
TrEMBL | A0A1S3C1Q0 | 0.0 | A0A1S3C1Q0_CUCME; basic leucine zipper 61-like | ||||
STRING | XP_008455472.1 | 0.0 | (Cucumis melo) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF2011 | 34 | 88 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G58120.1 | 1e-103 | bZIP family protein |
Publications ? help Back to Top | |||
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