PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | MELO3C015754P1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Cucumis
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Family | bZIP | ||||||||
Protein Properties | Length: 443aa MW: 48652 Da PI: 6.4121 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 47.1 | 5.1e-15 | 247 | 302 | 3 | 58 |
XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevak 58 + +r+rr+ +NRe+ArrsR+RK+a + eLe+ v +L e ++L k+l+ +++++ MELO3C015754P1 247 DARRARRMLSNRESARRSRRRKQAHLNELETQVGQLRVEHSTLLKRLSDVNQKYDD 302 679********************************************999998875 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.20.5.170 | 8.5E-11 | 244 | 300 | No hit | No description |
SMART | SM00338 | 3.6E-18 | 245 | 309 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 11.151 | 247 | 301 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 2.2E-12 | 248 | 301 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 6.03E-11 | 249 | 299 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 252 | 267 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF12498 | 8.2E-13 | 316 | 419 | IPR020983 | Basic leucine-zipper, C-terminal |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 443 aa Download sequence Send to blast |
MHTFFSSEDL SDNSFWPPQP APSSSPPSHS PFRSPDPSLK MNRSASEWAF ERFLEEVSAL 60 PVNSCPSTTS DRVAVSPVDV ASPASQSSTS KRDEGDDEIV EIKKADCDHD RSHPIPPSDP 120 SKMVRSSSER YRVFLKTQLD MACAAVALSR AASLEPKGPV QPADHRGQTS NAFQFGMQAP 180 GQGSDRGTST KESEVSGSPL GIPSLPAMPK KPGVQPAQTT SGSSRDESDD DDLEGDIENI 240 ENMDPADARR ARRMLSNRES ARRSRRRKQA HLNELETQVG QLRVEHSTLL KRLSDVNQKY 300 DDAAVDNRIL KADIETLRAK VKMAEETVKR VTGVNPLLVA MSQTQMPFVN SNQMPMQTNT 360 QFFHQNMSAF ANSPPNHQNL EVPVPPNPPT IQHVGRSHND VATEMTDLPS VHIDHVQKQP 420 MHAPMSGWDA EPSHATPNHK KN* |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 261 | 268 | RRSRRRKQ |
2 | 263 | 268 | SRRRKQ |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Binds to the G-box-like motif (5'-ACGTGGC-3') of the chalcone synthase (CHS) gene promoter. G-box and G-box-like motifs are defined in promoters of certain plant genes which are regulated by such diverse stimuli as light-induction or hormone control. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | LN681803 | 0.0 | LN681803.1 Cucumis melo genomic scaffold, anchoredscaffold00026. | |||
GenBank | LN713255 | 0.0 | LN713255.1 Cucumis melo genomic chromosome, chr_1. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_008451264.1 | 0.0 | PREDICTED: light-inducible protein CPRF2 | ||||
Swissprot | Q99090 | 7e-73 | CPRF2_PETCR; Light-inducible protein CPRF2 | ||||
TrEMBL | A0A1S3BS54 | 0.0 | A0A1S3BS54_CUCME; light-inducible protein CPRF2 | ||||
STRING | XP_008451264.1 | 0.0 | (Cucumis melo) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF13691 | 18 | 25 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G54620.1 | 2e-40 | basic leucine zipper 25 |
Publications ? help Back to Top | |||
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