PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MELO3C015210P1
Organism
Cucumis melo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Cucumis
Family EIL
Protein Properties Length: 604aa    MW: 67679.7 Da    PI: 5.2182
Description EIL family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MELO3C015210P1genomeMELONOMICSView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1EIN3432.34.6e-132404071347
                     XXXXXXXXXXXXXXXXXXXXXXX..XXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
            EIN3   1 eelkkrmwkdqmllkrlkerkkqlledkeaatgakksnksneqarrkkmsraQDgiLkYMlkemevcnaqGfvYgiipekgkpvegasdsLraWW 95 
                     e+l++rmwkd+++lkr+ker+k    +++ a++++k +++++qarrkkmsraQDgiLkYMlk mevc+a+GfvYgiipekgkpv+gasd++raWW
  MELO3C015210P1  40 EDLERRMWKDRIKLKRIKEREKIA--AQQ-AAEKQKPKQTSDQARRKKMSRAQDGILKYMLKLMEVCKARGFVYGIIPEKGKPVSGASDNIRAWW 131
                     89*****************99964..455.599************************************************************** PP

                     XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX....XX----STTS-HHHHHHHHHHHSSSSSS-TTS--TTT--HHHH---S--HHHHHHT--TT- CS
            EIN3  96 kekvefdrngpaaiskyqaknlilsgesslqtersseshslselqDTtlgSLLsalmqhcdppqrrfplekgvepPWWPtGkelwwgelglskdq 190
                     kekv+fd+ngpaai+ky+a++l+ ++++++   + ++++ l++lqD+tlgSLLs+lmqhcdppqr++plekgv+pPWWP+G+e+ww +lgls   
  MELO3C015210P1 132 KEKVKFDKNGPAAIAKYEAECLAKGEADGN--GNGNSQSVLQDLQDATLGSLLSSLMQHCDPPQRKYPLEKGVPPPWWPSGNEDWWVKLGLSPGN 224
                     ***********************9988888..5799999*****************************************************999 PP

                     -.-----GGG--HHHHHHHHHHHHHHTGGGHHHHHHTTTTSSSSTTT--SHHHHHHHHHHTTTTT-S--XXXXXX........XXXXXXXXXXXX CS
            EIN3 191 gtppykkphdlkkawkvsvLtavikhmsptieeirelerqskylqdkmsakesfallsvlnqeekecatvsahss........slrkqspkvtls 277
                     + ppykkphdlkk+wkv+vLtavikhmsp+i++ir+++rqsk+lqdkm+akes+++l vl++ee+++++ s+++            +++++  +s
  MELO3C015210P1 225 S-PPYKKPHDLKKMWKVGVLTAVIKHMSPDIAKIRRHVRQSKCLQDKMTAKESAIWLGVLSREESLIRQPSSDNGasgitetpVGGRGEKQAAAS 318
                     9.9**********************************************************************44456766654445999999** PP

                     XXXXXXXX.XXXXXX.XXXXXXXXXX...................XXXXXXXXXXXXXXXXXXXXX......XXXXXXX.XXXXXXXXXX CS
            EIN3 278 ceqkedve.gkkeskikhvqavktta...................gfpvvrkrkkkpsesakvsskevsrtcqssqfrgsetelifadkn 347
                     +e+++dv+  ++     +++++k+t+                   +++  ++rk++++ + k  + ++    q+++ ++ e++++  d n
  MELO3C015210P1 319 SESDYDVDlADDGVGSVSSKEDKRTRsvevepssnlrnnsqpaeeKEQGEKQRKRHRGGRIKPAN-RTLAPSQNAEEPSVEPRNTQLDIN 407
                     ********733333333334444444667777778888888886544444445444444444433.345667777777777776666655 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF048737.1E-12740287No hitNo description
Gene3DG3DSA:1.10.3180.103.2E-71163295IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
SuperFamilySSF1167681.83E-61168290IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0042762Biological Processregulation of sulfur metabolic process
GO:0071281Biological Processcellular response to iron ion
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 604 aa     Download sequence    Send to blast
MENIMMVDDA LGDCSDMEVD DIRCDNIAEK DVSDEEIDAE DLERRMWKDR IKLKRIKERE  60
KIAAQQAAEK QKPKQTSDQA RRKKMSRAQD GILKYMLKLM EVCKARGFVY GIIPEKGKPV  120
SGASDNIRAW WKEKVKFDKN GPAAIAKYEA ECLAKGEADG NGNGNSQSVL QDLQDATLGS  180
LLSSLMQHCD PPQRKYPLEK GVPPPWWPSG NEDWWVKLGL SPGNSPPYKK PHDLKKMWKV  240
GVLTAVIKHM SPDIAKIRRH VRQSKCLQDK MTAKESAIWL GVLSREESLI RQPSSDNGAS  300
GITETPVGGR GEKQAAASSE SDYDVDLADD GVGSVSSKED KRTRSVEVEP SSNLRNNSQP  360
AEEKEQGEKQ RKRHRGGRIK PANRTLAPSQ NAEEPSVEPR NTQLDINHSN VPLDRFEIPG  420
NQQQQDIATA LRPLEKDLDI QSEVPAPQLF NMFSAPSSDN INIISTQSMF VDGRPLLYPV  480
MQNSEMRHEN AYNIYNPSVE YRSNFDVQHS QFVNEPQMRL EEGGVHIPTQ HRNNETIGGE  540
FNYVKETFNA EQDRPVDPQF GSPINSLSLD YGAFNSPFHL GIDGASSFDD FLVDDDLIQY  600
FGA*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wij_A2e-751672989140ETHYLENE-INSENSITIVE3-like 3 protein
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription factor that may be involved in the ethylene response pathway. {ECO:0000269|PubMed:9215635, ECO:0000269|PubMed:9851977}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00233DAPTransfer from AT1G73730Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankLN6818070.0LN681807.1 Cucumis melo genomic scaffold, anchoredscaffold00024.
GenBankLN7132560.0LN713256.1 Cucumis melo genomic chromosome, chr_2.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008450447.10.0PREDICTED: ETHYLENE INSENSITIVE 3-like 3 protein isoform X1
SwissprotO231160.0EIL3_ARATH; ETHYLENE INSENSITIVE 3-like 3 protein
TrEMBLA0A1S3BPW70.0A0A1S3BPW7_CUCME; ETHYLENE INSENSITIVE 3-like 3 protein isoform X1
STRINGXP_008450447.10.0(Cucumis melo)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF32234200
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G73730.10.0ETHYLENE-INSENSITIVE3-like 3
Publications ? help Back to Top
  1. Frerigmann H,Gigolashvili T
    Update on the role of R2R3-MYBs in the regulation of glucosinolates upon sulfur deficiency.
    Front Plant Sci, 2014. 5: p. 626
    [PMID:25426131]
  2. Zheng ZL,Zhang B,Leustek T
    Transceptors at the boundary of nutrient transporters and receptors: a new role for Arabidopsis SULTR1;2 in sulfur sensing.
    Front Plant Sci, 2014. 5: p. 710
    [PMID:25566284]
  3. Panda SK,Sunkar R
    Nutrient- and other stress-responsive microRNAs in plants: Role for thiol-based redox signaling.
    Plant Signal Behav, 2015. 10(4): p. e1010916
    [PMID:25912823]
  4. Wawrzyńska A,Sirko A
    EIN3 interferes with the sulfur deficiency signaling in Arabidopsis thaliana through direct interaction with the SLIM1 transcription factor.
    Plant Sci., 2016. 253: p. 50-57
    [PMID:27968996]